BLAST/PSIBLAST alignment of GI: 254780694 and GI: 116250468 at iteration 1
>gi|116250468|ref|YP_766306.1| GerE/LuxR family transcriptional regulator [Rhizobium leguminosarum bv. viciae 3841] Length = 262
>gi|115255116|emb|CAK06190.1| regulator of flagellar and motility genes, also regulates rem [Rhizobium leguminosarum bv. viciae 3841] Length = 262
Score = 231 bits (589), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 122/229 (53%), Positives = 156/229 (68%), Gaps = 2/229 (0%)
Query: 20 TSFVSHLPTRSDLLARMIPLDCTVSWTMRMYALTEYVGASHFLLVRWDLFQEQKLDSIVS 79
++ V L R +LL R+ + T + ALT+YVGASH+LL R DL QE LD IVS
Sbjct: 34 SAVVPDLLPRDELLQRLHGVASTGRLQSGLRALTDYVGASHYLLARCDLLQESGLDFIVS 93
Query: 80 SDWPFDLVRCMALSEKDKYYNV--LQRPTELFCPVFHTLPENITPPAGMDNRYCSLTFDV 137
SDWPFDLVR +A Y L++ ++F P F LP++ P G +YCS+TF+V
Sbjct: 94 SDWPFDLVRDIANDLVRGYARSTELEKCMQVFQPNFALLPDSAEVPDGASRQYCSVTFNV 153
Query: 138 ARIRIGLMLLFPKGRIILRDRLWEIGLLAAYQANMFKSYDVHWGKDFELTGREVECLTWI 197
R R+ LM LF +G I+ +RL ++GLLA Y A+ + +DFELT RE+ECL WI
Sbjct: 154 GRSRLSLMFLFGEGFILSPERLRDVGLLAGYVASFLRCGGTKVDRDFELTDRELECLFWI 213
Query: 198 SEGKTSDEIAVILGISRNTVNNYIASIMRKTATKTRSGAIAYAVRNNIV 246
+EGKTSDEIA+ILGISRNT+NNYI S+MRKTATKTRS AIA+AVRNN+V
Sbjct: 214 AEGKTSDEIAMILGISRNTINNYITSVMRKTATKTRSEAIAFAVRNNLV 262