RPSBLAST alignment of GI: 254780694 and protein with PDBid: 1l3l

>1l3l_A Transcriptional activator protein TRAR; helix-turn-helix DNA binding motif, alpha/beta/alpha sandwich; HET: LAE; 1.66A {Agrobacterium tumefaciens} SCOP: a.4.6.2 d.110.5.1 PDB: 1h0m_A* Length = 234

 Score = 73.4 bits (179), Expect = 4e-14
 Identities = 23/128 (17%), Positives = 46/128 (35%), Gaps = 4/128 (3%)

Query: 123 PAGMDNRYCSLTFDVARIRIGLMLLFPKGRIILRDRLWEIGLLAAYQANMFKSYDVHW-- 180
             G+ +                 +   K  I L   +  +   A       +   +    
Sbjct: 107 DFGIRSGITIPIKTANGFMSMFTMASDKPVIDLDREIDAVAAAATIGQIHARISFLRTTP 166

Query: 181 --GKDFELTGREVECLTWISEGKTSDEIAVILGISRNTVNNYIASIMRKTATKTRSGAIA 238
                  L  +E   L WI+ GKT +EIA + G+  N+V   +   M++   ++++   A
Sbjct: 167 TAEDAAWLDPKEATYLRWIAVGKTMEEIADVEGVKYNSVRVKLREAMKRFDVRSKAHLTA 226

Query: 239 YAVRNNIV 246
            A+R  ++
Sbjct: 227 LAIRRKLI 234