HHsearch alignment for GI: 254780695 and conserved domain: TIGR02830

>TIGR02830 spore_III_AG stage III sporulation protein AG; InterPro: IPR014195 This entry represents the stage III sporulation protein AG, which is encoded in a spore formation operon: spoIIIAABCDEFGH under the control of sigma G . A comparative genome analysis of all sequenced genomes of Firmicutes shows that the proteins are strictly conserved among the sub-set of endospore-forming species..
Probab=96.12  E-value=0.023  Score=34.80  Aligned_cols=100  Identities=12%  Similarity=0.113  Sum_probs=53.1

Q ss_pred             HHHHHHHHHHHHCCCCCCE--EEEEC-CCCEEECCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE
Q ss_conf             9999999865401883526--99828-983500367-6533324799999999999999999887754087806999884
Q gi|254780695|r  189 EAIRHLVAAAVPNLDMGDV--TVLDS-TGKLLTANE-MERNILGKSLSIVQAIQHEIEMNINKALAAFLGVDNFRSAVVA  264 (563)
Q Consensus       189 ~~I~~lVa~sV~gL~~e~V--tVvD~-~G~~L~~~~-~~~~~~~~~~~~~~~~E~~~~~kI~~~L~~i~G~~~v~v~V~~  264 (563)
T Consensus        12 iG~~ll~~s~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yE~~~e~~Lk~~Le~I~GVg~V~V~vnL   91 (193)
T TIGR02830        12 IGLLLLLVSSFFSSSEDIEITAVVKESDTPNNEKTEPEFVQGEKQKEDEISDYEKEYENELKEILEKIEGVGDVTVMVNL   91 (193)
T ss_pred             HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE
T ss_conf             99999999876178566332542223335654455532256655444237999999999999986420375614899996


Q ss_pred             EEECCCEEEEEEEECCCCCCCCCEEEEEEECC
Q ss_conf             43223016788851478776542157763025
Q gi|254780695|r  265 ELNMDTQQIREIVYDPDSKVERSIRLSKDAQR  296 (563)
Q Consensus       265 ~ldfd~~~~~~e~y~p~~~~~~s~~~~~~~~~  296 (563)
T Consensus        92 ~------~~e~~v~ekN~--~~~~~tT~EtD~  115 (193)
T TIGR02830        92 D------SSEEKVYEKNT--SKGQQTTEETDK  115 (193)
T ss_pred             C------CCCEEEEEECC--CCCCEEEEEEEC
T ss_conf             5------99616667815--567536544744