HHsearch alignment for GI: 254780695 and conserved domain: TIGR02830
>TIGR02830 spore_III_AG stage III sporulation protein AG; InterPro: IPR014195 This entry represents the stage III sporulation protein AG, which is encoded in a spore formation operon: spoIIIAABCDEFGH under the control of sigma G . A comparative genome analysis of all sequenced genomes of Firmicutes shows that the proteins are strictly conserved among the sub-set of endospore-forming species..
Probab=96.12 E-value=0.023 Score=34.80 Aligned_cols=100 Identities=12% Similarity=0.113 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHCCCCCCE--EEEEC-CCCEEECCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE
Q ss_conf 9999999865401883526--99828-983500367-6533324799999999999999999887754087806999884
Q gi|254780695|r 189 EAIRHLVAAAVPNLDMGDV--TVLDS-TGKLLTANE-MERNILGKSLSIVQAIQHEIEMNINKALAAFLGVDNFRSAVVA 264 (563)
Q Consensus 189 ~~I~~lVa~sV~gL~~e~V--tVvD~-~G~~L~~~~-~~~~~~~~~~~~~~~~E~~~~~kI~~~L~~i~G~~~v~v~V~~ 264 (563)
T Consensus 12 iG~~ll~~s~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yE~~~e~~Lk~~Le~I~GVg~V~V~vnL 91 (193)
T TIGR02830 12 IGLLLLLVSSFFSSSEDIEITAVVKESDTPNNEKTEPEFVQGEKQKEDEISDYEKEYENELKEILEKIEGVGDVTVMVNL 91 (193)
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE
T ss_conf 99999999876178566332542223335654455532256655444237999999999999986420375614899996
Q ss_pred EEECCCEEEEEEEECCCCCCCCCEEEEEEECC
Q ss_conf 43223016788851478776542157763025
Q gi|254780695|r 265 ELNMDTQQIREIVYDPDSKVERSIRLSKDAQR 296 (563)
Q Consensus 265 ~ldfd~~~~~~e~y~p~~~~~~s~~~~~~~~~ 296 (563)
T Consensus 92 ~------~~e~~v~ekN~--~~~~~tT~EtD~ 115 (193)
T TIGR02830 92 D------SSEEKVYEKNT--SKGQQTTEETDK 115 (193)
T ss_pred C------CCCEEEEEECC--CCCCEEEEEEEC
T ss_conf 5------99616667815--567536544744