BLAST/PSIBLAST alignment of GI: 254780695 and GI: 116250467 at iteration 1
>gi|116250467|ref|YP_766305.1| flagellar MS-ring protein [Rhizobium leguminosarum bv. viciae 3841] Length = 561
>gi|115255115|emb|CAK06189.1| putative flagellar M-ring protein [Rhizobium leguminosarum bv. viciae 3841] Length = 561
Score = 558 bits (1439), Expect = e-157, Method: Compositional matrix adjust.
Identities = 302/563 (53%), Positives = 400/563 (71%), Gaps = 14/563 (2%)
Query: 1 MAILDQLLQFFKSGTSLGRTRILILASVILVPIMLFMAARFFVNSPHYDNLYVKLEVSDV 60
M +L+QL+Q FK+ SLGRTR++IL V + I + +AA FVN P + LYV L+ D+
Sbjct: 1 MNLLNQLVQIFKNFGSLGRTRLMILGGVGALSIAIILAAALFVNKPAQETLYVGLDSPDL 60
Query: 61 NRISVALSEANIDFRISDNGSSISVPSSMVGKARIHLAAQGLPSSSSNSGYELFDKVNSF 120
N+IS+AL+EANI+F++ +GSSISVP+ M GKAR+ LA +GLP+S+ N+GYELFD V S
Sbjct: 61 NQISMALAEANINFQVGTDGSSISVPAGMTGKARLMLAERGLPNSA-NAGYELFDNVGSL 119
Query: 121 GLTSFMQEITRVRALEGEIARTIQSISGIVAARVHIVMPDMGSFRKIGARPTASVMIRAI 180
GLTSFMQE+TRVRALEGEIARTIQSISGI AARVHIVMP++G+FRK +PTASVMIRA
Sbjct: 120 GLTSFMQEVTRVRALEGEIARTIQSISGITAARVHIVMPEVGNFRKAEQKPTASVMIRAS 179
Query: 181 NPSVYKSAEAIRHLVAAAVPNLDMGDVTVLDSTGKLL-TANEMERNILGKSLSIVQAIQH 239
+ +A +IRHLVA+AVP LD+ DVT+LDS G+LL + +E + L +SL+IVQ +Q
Sbjct: 180 ATTGRSAATSIRHLVASAVPGLDVDDVTILDSAGQLLASGDEASNSSLNRSLNIVQNVQQ 239
Query: 240 EIEMNINKALAAFLGVDNFRSAVVAELNMDTQQIREIVYDPDSKVERSIRLSKDAQRSET 299
E+E NI+KALA FLG+DNFRS+V A+LN D QQI+E YDP+SKVERS+R +K+AQ+S+
Sbjct: 240 EVESNIDKALAPFLGMDNFRSSVTADLNTDAQQIQETTYDPESKVERSVRSTKEAQQSQQ 299
Query: 300 SQPESAVTVEQNMPHVSDRK--VPLPRSLENTDKKEEQSNYEINTKSIATTHDNYKLERL 357
Q +SA TVEQN+P + P S + +DK+EEQ+NYEIN+K+ ATT +YK+E+L
Sbjct: 300 KQSDSATTVEQNIPQAAPEAGGSAGPESQDKSDKREEQTNYEINSKTTATTRSSYKVEKL 359
Query: 358 SIAVVVNKGRLTEVLGRSADQGKIDSYLAEINKIVSAATGINSRRGDTITITSMDFLENQ 417
SIAVVVNKGR+ +++G ADQ K+D+YLAE+ KIV++A GI+++RGD +T+T+MDFLENQ
Sbjct: 360 SIAVVVNKGRIAKMVGEPADQAKVDAYLAEMQKIVASAAGIDAKRGDVVTVTAMDFLENQ 419
Query: 418 LFNSGTVQVSFMDILSRHFATVINALVFLVGTLLVTFLGLHALRRLHNIDDAKKG----E 473
L T V MD+LSR+ A +IN+L F+ +V ++GL L R N A G E
Sbjct: 420 LLEDATGGVRVMDMLSRNLAGIINSLAFVAVAFVVVWMGLRPLVRSINGTSAAFGDATPE 479
Query: 474 VGGKSILSPPPISSAVTTGLMPNDNIALD---SSNQDIFSHSRNLQSRINSYVSKQSDLR 530
G + P S A LM D D S +D+ S + N V + + +
Sbjct: 480 AAGLELPDFAPASGAPGGALM--DGFGSDFGFDSTEDLLSLGDD-DGNFNRRVKEGPERK 536
Query: 531 LLHMIEINEERFAKILRKWARSE 553
L M+EINEER AKILRKWA E
Sbjct: 537 LSRMVEINEERAAKILRKWAIDE 559