RPSBLAST alignment for GI: 254780695 and conserved domain: PRK06007

>gnl|CDD|180348 PRK06007, fliF, flagellar MS-ring protein; Reviewed. Length = 542
 Score =  390 bits (1005), Expect = e-109
 Identities = 159/558 (28%), Positives = 278/558 (49%), Gaps = 39/558 (6%)

Query: 3   ILDQLLQFFKSGTSLGRTRILILASVILVPIMLFMAARFFVNSPHYDNLYVKLEVSDVNR 62
           ++++L +F +    L + R + L       +   +A   + + P Y  LY  L   D  +
Sbjct: 8   LMEKLKEFLQK---LSKKRKIALIGAGAAVVAAIVALVLWASRPDYRVLYSNLSDQDAGQ 64

Query: 63  ISVALSEANIDFRISDNGSSISVPSSMVGKARIHLAAQGLPSSSSNSGYELFDKVNSFGL 122
           I  AL +A I ++++D+G +I VP+  V + R+ LA++GLP S S  GYELFDK + FG+
Sbjct: 65  IVAALDQAGIPYKVADDGGTILVPADKVDELRLKLASEGLPKSGS-VGYELFDKSSGFGI 123

Query: 123 TSFMQEITRVRALEGEIARTIQSISGIVAARVHIVMPDMGSFRKIGARPTASVMI----- 177
           T F +++   RALEGE+ARTI+S+ G+ AARVH+ +P    F +    P+ASV++     
Sbjct: 124 TQFEEQVNYQRALEGELARTIESLDGVKAARVHLALPKESVFVREQQPPSASVVLTLKPG 183

Query: 178 RAINPSVYKSAEAIRHLVAAAVPNLDMGDVTVLDSTGKLLT--ANEMERNILGKSLSIVQ 235
           RA++P   +  +AI HLVA+AVP L   +VT++D  G+LL+  +++   ++  K L   Q
Sbjct: 184 RALDP---EQVKAIVHLVASAVPGLKPENVTIVDQNGRLLSDGSDDSASDLAEKQLKYKQ 240

Query: 236 AIQHEIEMNINKALAAFLGVDNFRSAVVAELNMDTQQIREIVYDPDSKVERSIRLSKDAQ 295
            ++  ++  I   LA  LG  N R+ V A+L+ D  +  E  YDP+  V RS +  ++  
Sbjct: 241 QVEKRLQQRIESILAPILGPGNVRAQVTADLDFDKVEQTEETYDPNQGVVRSEQTVEETS 300

Query: 296 RSETSQPESAVTVEQNMPHVSDRKVPLPRSLENTDKKEEQSNYEINTKSIATTHDNYKLE 355
             +   P        N P    +      S  ++ + EE +NYE++     T      ++
Sbjct: 301 TGQGGNPGGVPGALSNQPPNQAQGADGGNSTSSSSRSEETTNYEVDKTISHTKKQPGTVK 360

Query: 356 RLSIAVVVNKGRLTEVLGRSADQGKIDSYLAEINKIVSAATGINSRRGDTITITSMDFLE 415
           RLS+AVVV+   L +  G    Q   D  LA+I K+V +A G +++RGD++ + ++ F E
Sbjct: 361 RLSVAVVVDGKPLADGDGEVEYQPLSDEELAQIEKLVRSAVGFDAKRGDSVNVVNVPFDE 420

Query: 416 NQLFNSGTV----QVSFMDILSRHFATVINALVFLVGTLLVTFLGLHALRRLHNIDDAKK 471
                +  +    Q  FMD+       +  A   L+  +L+ F+    LR L   ++  +
Sbjct: 421 EAEEEAAELPFWQQPWFMDL-------IKLAAGALLILILIFFVLRPRLRPLLPEEELAE 473

Query: 472 GEVGGKSILSPPPISSAVTTGLMPNDNIALDSSNQDIFSHSRNLQSRINSYVSKQSDLRL 531
            E   +         +A+   L  ++ +  + + +++                +    RL
Sbjct: 474 EEAAAEEAALEEDEEAALEVELSDDEELEEEKAEEEL--------------KYEDLLKRL 519

Query: 532 LHMIEINEERFAKILRKW 549
             + + + E  A++LR W
Sbjct: 520 RELAKEDPEEVAQVLRTW 537