HHsearch alignment for GI: 254780696 and conserved domain: COG1038
>COG1038 PycA Pyruvate carboxylase [Energy production and conversion].
Probab=98.04 E-value=0.00017 Score=49.87 Aligned_cols=281 Identities=17% Similarity=0.210 Sum_probs=153.2
Q ss_pred CCCEEEEEECCHHHCCCCCCCHHHHHHHHHHCCCEEEEEEHHHEEEECCEEEEEEEEE-EEECCC-CCEEEECCCCC-CC
Q ss_conf 5331899709988848476467999999998898899995412489998999999999-980777-41265046443-52
Q gi|254780696|r 3 KIRNIAIQMNHISTVKVKEDSTFAIALEAQVRGYQIFHYTPDQLYMRDSKIYANTQPL-SLDEKK-EQYYSLGEEKI-ID 79 (316)
Q Consensus 3 k~~kI~fimDpi~~i~~~~DTT~~Lm~eAq~RGheV~~~~~~dL~~~~g~v~A~~~~i-~i~~~~-~~~f~~~~~~~-~~ 79 (316)
T Consensus 6 ~~~KvLVA--------NRgEIAIRvFRAa~ELgi~TVAIys~ED~~S~HR~KADEsY~iG~~~~Pi~aYL~IdeII~iAk 77 (1149)
T COG1038 6 KIKKVLVA--------NRGEIAIRVFRAANELGIKTVAIYSEEDRLSLHRFKADESYLIGEGKGPVEAYLSIDEIIRIAK 77 (1149)
T ss_pred HHHEEEEE--------CCCHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHCCCCCEEECCCCCCCHHHHCCHHHHHHHHH
T ss_conf 10202550--------4533669999988860864899851445430443035510660678872687432999999999
Q ss_pred HHHCCEEEEECCCCCCHHHHH-HHHHHHHH-CCCCE-EECCHHHHHHCCCHHHHHHHHH-----HCCCCE-EECCHHHHH
Q ss_conf 100636688328862247999-99999862-35850-4117488752565034334543-----044310-003724556
Q gi|254780696|r 80 LSQMDVILIRQDPPFNMHYIT-STYLLEKI-NPETL-IVNNPFWIRNSPEKIFVTEFSE-----LMPPTL-ISRDITQIT 150 (316)
Q Consensus 80 L~~fD~i~iR~dPp~d~~yi~-~~~~Le~~-~~~~~-viN~p~~i~~~~eKl~~~~~~~-----~~P~T~-vt~~~~~~~ 150 (316)
T Consensus 78 ~~gaDaIhPGYG------fLSEn~efA~~c~eaGI~FIGP~~e~ld~~GdKv~Ar~~A~~agvPvipgt~~~~~~~ee~~ 151 (1149)
T COG1038 78 RSGADAIHPGYG------FLSENPEFARACAEAGITFIGPKPEVLDMLGDKVKARNAAIKAGVPVIPGTDGPIETIEEAL 151 (1149)
T ss_pred HCCCCEECCCCC------CCCCCHHHHHHHHHCCCEEECCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
T ss_conf 708873137843------24479899999997597896888799988442888999999759985569999821299999
Q ss_pred HHHHHHH-HHHHHCCCCCCCCCEEEECCCCCCHHHHH-----HHHHHHCCCCCCEEECCCCCCCCCEEEEEEC---CEEE
Q ss_conf 8888521-43311168854344687448871158899-----9998400133400210534456826999989---9886
Q gi|254780696|r 151 RFYLEMK-DIIIKPLYGNGGTGVFRITLGDRNFSSLI-----EMLFEKYPEPLMIQSYLPQIRDGDKRILLLN---GKPV 221 (316)
Q Consensus 151 ~f~~~~~-~vViKPl~g~~G~gV~~i~~~~~~~~~~~-----e~~~~~~~~~ii~Qefi~~~~~gD~Rv~vi~---g~~v 221 (316)
T Consensus 152 ~fa~~~gyPvmiKA~~GGGGRGMR~vr-~~~~l~~~~~~AksEAkaAFG~~eVyvEk~ve~pkH--IEVQiLgD~~Gnvv 228 (1149)
T COG1038 152 EFAEEYGYPVMIKAAAGGGGRGMRVVR-SEADLAEAFERAKSEAKAAFGNDEVYVEKLVENPKH--IEVQILGDTHGNVV 228 (1149)
T ss_pred HHHHHCCCCEEEEECCCCCCCCEEEEC-CHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCCCE--EEEEEEECCCCCEE
T ss_conf 999866985899971479866526625-888999999998899997418980665655248652--68998605778788
Q ss_pred EEEEEECCCCCCCCCCCCCCCEEEEECCHHHH-HHHHHHHHHHHHCCCEEEE-EEEE----CC-EEEEEECCCCHHHHH-
Q ss_conf 32122045686000000147311100778999-9999999999984987999-9511----78-788983688303788-
Q gi|254780696|r 222 GAVNRIPSEVDNRSNIHAGGKAELTKLTKIDL-DICKRIGESLRERGLFFTG-IDVI----GD-YITEINVTSPTCIRE- 293 (316)
Q Consensus 222 ~a~~R~~~~~~~r~Nl~~Gg~~~~~~lt~~~~-~i~~~~~~~L~~~gl~~~G-iDii----g~-~i~EvNvtsP~g~~~- 293 (316)
T Consensus 229 HLfERDCSv--QRRhQKVVE~APa~~L~~~~R~~ic~~Avkla~~~~Y~~AGTvEFLvd~~~~fyFIEvN---PRiQVEH 303 (1149)
T COG1038 229 HLFERDCSV--QRRHQKVVEVAPAPYLSPELRDEICDDAVKLARNIGYINAGTVEFLVDEDGKFYFIEVN---PRIQVEH 303 (1149)
T ss_pred EEEECCCCH--HHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEC---CCEEEEE
T ss_conf 886235533--10144037856888899999999999999999973976566478887388868999954---7345677
Q ss_pred --HHHHCCCCHHHH
Q ss_conf --997519998999
Q gi|254780696|r 294 --IHRNGGENVASL 305 (316)
Q Consensus 294 --~~~~~~~~i~~~ 305 (316)
T Consensus 304 TiTE~vTgiDIV~a 317 (1149)
T COG1038 304 TITEEITGIDIVKA 317 (1149)
T ss_pred EEEEEEECHHHHHH
T ss_conf 64554412167887