HHsearch results for GI: 254780696 and protein with PDBid: 1a9x_A

>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A*
Probab=99.03  E-value=3.9e-09  Score=78.87  Aligned_cols=281  Identities=15%  Similarity=0.175  Sum_probs=162.1

Q ss_pred             CCEEEEEECCHHHCCCC---CCCHHHHHHHHHHCCCEEEEEEHHHEEEECCEEEEEEEEEEEECCCCCEEEECCCCCCCH
Q ss_conf             33189970998884847---646799999999889889999541248999899999999998077741265046443521
Q gi|254780696|r    4 IRNIAIQMNHISTVKVK---EDSTFAIALEAQVRGYQIFHYTPDQLYMRDSKIYANTQPLSLDEKKEQYYSLGEEKIIDL   80 (316)
Q Consensus         4 ~~kI~fimDpi~~i~~~---~DTT~~Lm~eAq~RGheV~~~~~~dL~~~~g~v~A~~~~i~i~~~~~~~f~~~~~~~~~L   80 (316)
                      ++||+++.-=.-.+--.   -.|....++++++.|+++-..+++--++.-..-.|..  +-+.+-...+  +  .+.+.-
T Consensus         7 ikKVLIiGsG~i~IGqa~EfDys~~qai~alke~Gi~tVlVnsNpati~td~~~AD~--vYiePlt~e~--i--~~Ii~~   80 (1073)
T 1a9x_A            7 IKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEMADA--TYIEPIHWEV--V--RKIIEK   80 (1073)
T ss_dssp             CCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGGGSSE--EECSCCCHHH--H--HHHHHH
T ss_pred             CCEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCCCCE--EEECCCCHHH--H--HHHHHH
T ss_conf             888999888802313010137789999999998799899985884462488441506--7987899999--9--999998


Q ss_pred             HHCCEEEEECCCCCC-HHHHHHHHHHHHH---C-CCCEEE-CCHHHHHHCCCHHHHHHHH----HHCCCCEEECCHHHHH
Q ss_conf             006366883288622-4799999999862---3-585041-1748875256503433454----3044310003724556
Q gi|254780696|r   81 SQMDVILIRQDPPFN-MHYITSTYLLEKI---N-PETLIV-NNPFWIRNSPEKIFVTEFS----ELMPPTLISRDITQIT  150 (316)
Q Consensus        81 ~~fD~i~iR~dPp~d-~~yi~~~~~Le~~---~-~~~~vi-N~p~~i~~~~eKl~~~~~~----~~~P~T~vt~~~~~~~  150 (316)
                      ..-|+|++-    |- +..++...-|+..   + .++.+| =+|++|+...||-..-++.    .++|+..+.++.+++.
T Consensus        81 e~pDaI~p~----~GgqtaLnl~~~L~e~gil~~~gI~~iGps~~~I~~~~Dr~~~r~~m~~~gvPv~~s~~v~s~eea~  156 (1073)
T 1a9x_A           81 ERPDAVLPT----MGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEAL  156 (1073)
T ss_dssp             HCCSEEECS----SSHHHHHHHHHHHHHTTHHHHHTCEECSSCHHHHHHHHSHHHHHHHHHHTTCCCCSEEEESSHHHHH
T ss_pred             HCCCEEEEC----CCCHHHHHHHHHHHHCCCHHHCCCEEECCCHHHHHHHHCHHHHHHHHHHCCCCCCCCEEECCHHHHH
T ss_conf             589999988----8784789999999975967877988988999999972599999999997799989972208999999


Q ss_pred             HHHHHHH-HHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHH-HHCCCCCCEEECCCCCCCCCEEEEEE---CCEE--EEE
Q ss_conf             8888521-433111688543446874488711588999998-40013340021053445682699998---9988--632
Q gi|254780696|r  151 RFYLEMK-DIIIKPLYGNGGTGVFRITLGDRNFSSLIEMLF-EKYPEPLMIQSYLPQIRDGDKRILLL---NGKP--VGA  223 (316)
Q Consensus       151 ~f~~~~~-~vViKPl~g~~G~gV~~i~~~~~~~~~~~e~~~-~~~~~~ii~Qefi~~~~~gD~Rv~vi---~g~~--v~a  223 (316)
                      ++.++.| ||++||.+|.||+|...+ .++..+...++... ..+..++++.+||...+  .+=+-|+   .|..  +|.
T Consensus       157 ~~A~~IGyPViIrps~~~GG~Gm~iv-~~~~eL~~~~~~a~~~s~~~~vliEk~i~g~k--eIEvqVlrD~~gn~i~v~~  233 (1073)
T 1a9x_A          157 AVAADVGFPCIIRPSFTMGGSGGGIA-YNREEFEEICARGLDLSPTKELLIDESLIGWK--EYEMEVVRDKNDNCIIVCS  233 (1073)
T ss_dssp             HHHHHHCSSEEEEETTCCTTTTCEEE-SSHHHHHHHHHHHHHHCTTSCEEEEECCTTSE--EEEEEEEECTTCCEEEEEE
T ss_pred             HHHHHCCCCEEEEECCCCCCCCCCEE-CCHHHHHHHHHHHHHHCCCCCEEEEEECCCCE--EEEEEEEECCCCCEEEEEE
T ss_conf             99986599889997877899876077-79999999999999738998679998517855--8999998717998899941


Q ss_pred             EEEECCCCCCCCCCCCCCCEE---EEECCHHHH----HHHHHHHHHHHHCCCEEEE--EEEE-----CC-EEEEEECCCC
Q ss_conf             122045686000000147311---100778999----9999999999984987999--9511-----78-7889836883
Q gi|254780696|r  224 VNRIPSEVDNRSNIHAGGKAE---LTKLTKIDL----DICKRIGESLRERGLFFTG--IDVI-----GD-YITEINVTSP  288 (316)
Q Consensus       224 ~~R~~~~~~~r~Nl~~Gg~~~---~~~lt~~~~----~i~~~~~~~L~~~gl~~~G--iDii-----g~-~i~EvNvtsP  288 (316)
                      +.+.-+-|.     |.|=+.+   ...|+++++    +.|.++++.+   |+.-+|  |-+.     +. |++|+|   |
T Consensus       234 ~E~~d~~Gi-----htgdsI~vaPa~tL~d~~~q~lr~aA~kia~~l---~~~~gg~nVqFa~d~~~~~~y~iEvN---p  302 (1073)
T 1a9x_A          234 IENFDAMGI-----HTGDSITVAPAQTLTDKEYQIMRNASMAVLREI---GVETGGSNVQFAVNPKNGRLIVIEMN---P  302 (1073)
T ss_dssp             EEESSCTTS-----CGGGSCEEESCCSCCHHHHHHHHHHHHHHHHHH---TCCSEEEEEEEEECTTTCCEEEEEEE---S
T ss_pred             CHHHHHHCC-----CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHC---CCCCCCCEEEEEECCCCCCEEEEEEC---C
T ss_conf             011334202-----246604881276389999999999999999974---94336633699874899958999823---5


Q ss_pred             HHHHH---HHHHCCCCHHHHHHH
Q ss_conf             03788---997519998999999
Q gi|254780696|r  289 TCIRE---IHRNGGENVASLFWD  308 (316)
Q Consensus       289 ~g~~~---~~~~~~~~i~~~i~d  308 (316)
                      ---++   .+.+||.+++..-+.
T Consensus       303 R~srs~~vaskaTG~pia~v~ak  325 (1073)
T 1a9x_A          303 RVSRSSALASKATGFPIAKVAAK  325 (1073)
T ss_dssp             SCCHHHHHHHHHHSCCHHHHHHH
T ss_pred             CCCCHHHHHHHHCCCCHHHHHHH
T ss_conf             31101444456408868999999