HHsearch results for GI: 254780696 and protein with PDBid: 1uc8_A

Probab=100.00  E-value=1.1e-32  Score=233.30  Aligned_cols=255  Identities=18%  Similarity=0.202  Sum_probs=202.8

Q ss_pred             HHHHHHHHHHCCCEEEEEEHHHEEEECCEEEEEEEEEEEECCCCCEEEECCCCCCCHHHCCEEEEECCCCCCHHHHHHHH
Q ss_conf             79999999988988999954124899989999999999807774126504644352100636688328862247999999
Q gi|254780696|r   24 TFAIALEAQVRGYQIFHYTPDQLYMRDSKIYANTQPLSLDEKKEQYYSLGEEKIIDLSQMDVILIRQDPPFNMHYITSTY  103 (316)
Q Consensus        24 T~~Lm~eAq~RGheV~~~~~~dL~~~~g~v~A~~~~i~i~~~~~~~f~~~~~~~~~L~~fD~i~iR~dPp~d~~yi~~~~  103 (316)
                      ..+|++|++++||++..+++.+..+.                      . ......++.+|++++|..+..  ..++...
T Consensus        13 e~~l~~a~~~~G~~v~~v~~~~~~~~----------------------~-~~~~~~~~~~d~~~~~~~~~~--~~~~~~~   67 (280)
T 1uc8_A           13 ERMLFERAEALGLPYKKVYVPALPMV----------------------L-GERPKELEGVTVALERCVSQS--RGLAAAR   67 (280)
T ss_dssp             HHHHHHHHHHHTCCEEEEEGGGCCEE----------------------T-TBCCGGGTTCCEEEECCSSHH--HHHHHHH
T ss_pred             HHHHHHHHHHCCCEEEEEECCCCCEE----------------------C-CCCCCCCCCCEEEEEEECCCC--CHHHHHH
T ss_conf             99999999977998999978976234----------------------4-776443103508999803566--0899999


Q ss_pred             HHHHHCCCCEEECCHHHHHHCCCHHHHHHHHH----HCCCCEEECCHHHHHHHHHHHH-HHHHHCCCCCCCCCEEEECCC
Q ss_conf             99862358504117488752565034334543----0443100037245568888521-433111688543446874488
Q gi|254780696|r  104 LLEKINPETLIVNNPFWIRNSPEKIFVTEFSE----LMPPTLISRDITQITRFYLEMK-DIIIKPLYGNGGTGVFRITLG  178 (316)
Q Consensus       104 ~Le~~~~~~~viN~p~~i~~~~eKl~~~~~~~----~~P~T~vt~~~~~~~~f~~~~~-~vViKPl~g~~G~gV~~i~~~  178 (316)
                      ++|.+  |+.++|+|.+++.+.||..+.++.+    ++|+|.+.++.+++..+.++.+ |+|+||.+|++|+|+.++...
T Consensus        68 ~~e~~--g~~~~n~~~a~~~~~dK~~~~~~l~~~gip~P~~~~~~~~~~~~~~~~~~~~P~VvKP~~g~~g~G~~~~~~~  145 (280)
T 1uc8_A           68 YLTAL--GIPVVNRPEVIEACGDKWATSVALAKAGLPQPKTALATDREEALRLMEAFGYPVVLKPVIGSWGRLLAXXXXX  145 (280)
T ss_dssp             HHHHT--TCCEESCHHHHHHHHBHHHHHHHHHHTTCCCCCEEEESSHHHHHHHHHHHCSSEEEECSBCCBCSHHHHHHHH
T ss_pred             HHHHC--CCCEECCHHHHHHHCCHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCC
T ss_conf             99988--9958799999987469999999999879796887997999999999997099689972888887676532111


Q ss_pred             CCC--HHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEEECCEEEEEEEEECCCCCCCCCCCCCCCEEEEECCHHHHHHH
Q ss_conf             711--588999998400133400210534456826999989988632122045686000000147311100778999999
Q gi|254780696|r  179 DRN--FSSLIEMLFEKYPEPLMIQSYLPQIRDGDKRILLLNGKPVGAVNRIPSEVDNRSNIHAGGKAELTKLTKIDLDIC  256 (316)
Q Consensus       179 ~~~--~~~~~e~~~~~~~~~ii~Qefi~~~~~gD~Rv~vi~g~~v~a~~R~~~~~~~r~Nl~~Gg~~~~~~lt~~~~~i~  256 (316)
                      +..  .......+......++++||||+. .+.|+|++++||++++++.|.  .++|+.|.+.++....+.++++.++++
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~liqefI~~-~~~~~~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (280)
T 1uc8_A          146 XXXXXXXXXKEVLGGFQHQLFYIQEYVEK-PGRDIRVFVVGERAIAAIYRR--SAHWITNTARGGQAENCPLTEEVARLS  222 (280)
T ss_dssp             HC------------CTTTTCEEEEECCCC-SSCCEEEEEETTEEEEEEEC----------------CEECCCCHHHHHHH
T ss_pred             CCCCCHHHHHHHHHCCCCCCEEEEEEECC-CCCEEEEEEECCEEEEEEEEE--CCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf             11110136788760347983999998368-883699999799899999952--245555553366444542314559999


Q ss_pred             HHHHHHHHHCCCEEEEEEEE----CCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf             99999999849879999511----7878898368830378899751999899999999886
Q gi|254780696|r  257 KRIGESLRERGLFFTGIDVI----GDYITEINVTSPTCIREIHRNGGENVASLFWDGIEKI  313 (316)
Q Consensus       257 ~~~~~~L~~~gl~~~GiDii----g~~i~EvNvtsP~g~~~~~~~~~~~i~~~i~d~ie~~  313 (316)
                      .++++.+   |+.|+|||++    |.|++||| +.| |+.+++..+|+|+++.++|+.-.+
T Consensus       223 ~~~~~al---gl~~~gvD~i~~~~g~~viEvN-~rp-g~~~~~~~~g~d~~~~iv~~al~l  278 (280)
T 1uc8_A          223 VKAAEAV---GGGVVAVDLFESERGLLVNEVN-HTM-EFKNSVHTTGVDIPGEILKYAWSL  278 (280)
T ss_dssp             HHHHHHT---TCSEEEEEEEEETTEEEEEEEE-TTC-CCTTHHHHHCCCHHHHHHHHHHHT
T ss_pred             HHHHHHH---CCCEEEEEEEEECCCEEEEEEC-CCC-CCCHHHHHHCCCHHHHHHHHHHHH
T ss_conf             9999983---9987999999989968999980-899-963079887927999999999865