HHsearch results for GI: 254780696 and protein with PDBid: 1vkz_A
>1vkz_A Phosphoribosylamine--glycine ligase; TM1250, structural genomics, JCSG, protein structure initiative, PSI; 2.30A {Thermotoga maritima} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=98.77 E-value=4.5e-07 Score=65.35 Aligned_cols=270 Identities=15% Similarity=0.201 Sum_probs=146.6
Q ss_pred CCCCCEEEEEECCHHHCCCCCCCHHHHHHHHHHCCCEEEEEEHHHEEEECCEEEEEEEEEEEECCCCCEEEECCCCCCCH
Q ss_conf 96533189970998884847646799999999889889999541248999899999999998077741265046443521
Q gi|254780696|r 1 MKKIRNIAIQMNHISTVKVKEDSTFAIALEAQVRGYQIFHYTPDQLYMRDSKIYANTQPLSLDEKKEQYYSLGEEKIIDL 80 (316)
Q Consensus 1 mkk~~kI~fimDpi~~i~~~~DTT~~Lm~eAq~RGheV~~~~~~dL~~~~g~v~A~~~~i~i~~~~~~~f~~~~~~~~~L 80 (316)
|+. |||+++..-= ---||++..++.++++|.+. ..=.... .+.+.. -+....|. ..
T Consensus 13 ~~~-~rVLviGsGg--------REHAia~~l~~s~~~v~~~p-gN~g~~~---~~~~~~----~~~~~~~~-------~~ 68 (412)
T 1vkz_A 13 MKA-VRVHILGSGG--------REHAIGWAFAKQGYEVHFYP-GNAGTKR---DGTNHP----YEGEKTLK-------AI 68 (412)
T ss_dssp ----CEEEEEECSH--------HHHHHHHHHHHTTCEEEEEE-CCTTGGG---TSEECC----CCTHHHHH-------TS
T ss_pred HHC-CEEEEECCCH--------HHHHHHHHHHCCCCCEEEEC-CCHHHHH---HCCCCC----CCHHHHHH-------HH
T ss_conf 426-7899999788--------99999999856998089968-9878874---254468----50078776-------40
Q ss_pred HHCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEECCHHHHHHCCCHHHHHHHHH----HCCCCEEECCHHHHHHHHHHH
Q ss_conf 0063668832886224799999999862358504117488752565034334543----044310003724556888852
Q gi|254780696|r 81 SQMDVILIRQDPPFNMHYITSTYLLEKINPETLIVNNPFWIRNSPEKIFVTEFSE----LMPPTLISRDITQITRFYLEM 156 (316)
Q Consensus 81 ~~fD~i~iR~dPp~d~~yi~~~~~Le~~~~~~~viN~p~~i~~~~eKl~~~~~~~----~~P~T~vt~~~~~~~~f~~~~ 156 (316)
.+.|.+++--.-|.- .++ -+... . .+--+..+.+...+|.++-+|.+ ++|+-...++.+++.+|++++
T Consensus 69 ~~~dlvvvgpE~pL~-~gl-----~d~~~-~-vfGPs~~aA~LE~SK~faK~~m~~~~IPta~~~~f~~~~ea~~~~~~~ 140 (412)
T 1vkz_A 69 PEEDIVIPGSEEFLV-EGV-----SNWRS-N-VFGPVKEVARLEGSKVYAKRFMKKYGIRTARFEVAETPEELREKIKKF 140 (412)
T ss_dssp CSSCEECCSSGGGTC-C----------CT-T-BSSCCHHHHHHHHCHHHHHHHHHHTTCCCCCEEEESSHHHHHHHHTTS
T ss_pred CCCCEEEECCCHHHH-HHH-----HHCCC-C-EECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHC
T ss_conf 479989989789999-778-----87588-7-449798999988759999999997088988511026799999998717
Q ss_pred H-HHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHH----CCCCCCEEECCCCCCCCCEEEEEE-CC-EEE--EE---E
Q ss_conf 1-43311168854344687448871158899999840----013340021053445682699998-99-886--32---1
Q gi|254780696|r 157 K-DIIIKPLYGNGGTGVFRITLGDRNFSSLIEMLFEK----YPEPLMIQSYLPQIRDGDKRILLL-NG-KPV--GA---V 224 (316)
Q Consensus 157 ~-~vViKPl~g~~G~gV~~i~~~~~~~~~~~e~~~~~----~~~~ii~Qefi~~~~~gD~Rv~vi-~g-~~v--~a---~ 224 (316)
+ |+|+||-...+|+||+.+...++....+.+.+... ....++++||+... +.-++++ || .++ .. +
T Consensus 141 ~~PvVIKadgla~GKGV~i~~~~~ea~~~~~~~~~~~~~~~~~~~vvIEe~l~G~---E~S~~~~~dG~~~~~lp~~qD~ 217 (412)
T 1vkz_A 141 SPPYVIKADGLARGKGVLILDSKEETIEKGSKLIIGELIKGVKGPVVIDEFLAGN---ELSAMAVVNGRNFVILPFVRDY 217 (412)
T ss_dssp CSSEEEEESSCCSSCCEEEESSHHHHHHHHHHHHHTSSSTTCCSCEEEEECCCSE---EEEEEEEEETTEEEECCCCEEC
T ss_pred CCCEEEEECCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCCEEEHHHHCCCC---EEEEEEEECCCEEEECCCCCCC
T ss_conf 9978997086678886489841576899999860242026763025547555796---2379999438959989540023
Q ss_pred EEECCCCCCCCCCCCCC--CEEEEECCHHH----HHHHHHHHHHHHHCCCEEEEEEEE-------CCEEEEEECCC--CH
Q ss_conf 22045686000000147--31110077899----999999999999849879999511-------78788983688--30
Q gi|254780696|r 225 NRIPSEVDNRSNIHAGG--KAELTKLTKID----LDICKRIGESLRERGLFFTGIDVI-------GDYITEINVTS--PT 289 (316)
Q Consensus 225 ~R~~~~~~~r~Nl~~Gg--~~~~~~lt~~~----~~i~~~~~~~L~~~gl~~~GiDii-------g~~i~EvNvts--P~ 289 (316)
.|. -.||-=.| .|| ...+..+...+ .++.......|.+.|+.|.|+=.+ |+||+|+|+-- |.
T Consensus 218 Kr~-~dgd~Gpn--TGGMGa~sp~~~~~~~~~~~~~ii~~~~~~l~~eg~~y~GiLy~glmit~~gpkvlE~N~RfGDPE 294 (412)
T 1vkz_A 218 KRL-MDGDRGPN--TGGMGSWGPVEIPSDTIKKIEELFDKTLWGVEKEGYAYRGFLYLGLMLHDGDPYILEYNVRLGDPE 294 (412)
T ss_dssp CEE-ETTTEEEE--CSCSEEEECCCCCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEEEEEETTEEEEEEEESSCCTTH
T ss_pred CCC-CCCCCCCC--CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCEEEEEECCCCCCC
T ss_conf 110-16999999--887876478775567888889999999999997499667155135587189856999633558950
Q ss_pred HHHHHHHHCCCCHHHHHHHH
Q ss_conf 37889975199989999999
Q gi|254780696|r 290 CIREIHRNGGENVASLFWDG 309 (316)
Q Consensus 290 g~~~~~~~~~~~i~~~i~d~ 309 (316)
.+-+-.+...|+...+++.
T Consensus 295 -~q~ll~ll~~dl~~~~~~~ 313 (412)
T 1vkz_A 295 -TEVIVTLNPEGFVNAVLEG 313 (412)
T ss_dssp -HHHHHHHCHHHHHHHHHHH
T ss_pred -HHHEECCCHHHHHHHHHHH
T ss_conf -4210023504679999998