HHsearch results for GI: 254780696 and protein with PDBid: 2vpq_A
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=99.25 E-value=9.5e-09 Score=76.30 Aligned_cols=266 Identities=14% Similarity=0.119 Sum_probs=145.6
Q ss_pred CHHHHHHHHHHCCCEEEEE-EHHH-EEEE---CCEEEEEEEEEEEECCCCCEEEECCC-CCCCHHHCCEEEEECCCCCCH
Q ss_conf 6799999999889889999-5412-4899---98999999999980777412650464-435210063668832886224
Q gi|254780696|r 23 STFAIALEAQVRGYQIFHY-TPDQ-LYMR---DSKIYANTQPLSLDEKKEQYYSLGEE-KIIDLSQMDVILIRQDPPFNM 96 (316)
Q Consensus 23 TT~~Lm~eAq~RGheV~~~-~~~d-L~~~---~g~v~A~~~~i~i~~~~~~~f~~~~~-~~~~L~~fD~i~iR~dPp~d~ 96 (316)
--+.++++|++.|+++... ...| .+.. -.+++ .+........+.....- +.......|+|++--. |-.
T Consensus 12 iA~riira~relGi~tVaV~s~~D~~a~~~~~ADe~~----~i~~~~~~~syLd~~~Ii~ia~~~~~DaIhPGyG--fls 85 (451)
T 2vpq_A 12 IAVRIIRACRDLGIQTVAIYSEGDKDALHTQIADEAY----CVGPTLSKDSYLNIPNILSIATSTGCDGVHPGYG--FLA 85 (451)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEGGGTTCHHHHHSSEEE----EEECSSGGGTTTCHHHHHHHHHHTTCSEEECCSS--TTT
T ss_pred HHHHHHHHHHHCCCEEEEECCCHHHCCCCHHHCCEEE----EECCCCCCCCCCCHHHHHHHHHHHCCCEEEECHH--HHC
T ss_conf 9999999999879959998483674688977889999----8189864234368999999999978299995866--634
Q ss_pred HHHHHHHHHHHHCCCCE-EECCHHHHHHCCCHHHHHHHHH----H-CCCCE-EECCHHHHHHHHHHHH-HHHHHCCCCCC
Q ss_conf 79999999986235850-4117488752565034334543----0-44310-0037245568888521-43311168854
Q gi|254780696|r 97 HYITSTYLLEKINPETL-IVNNPFWIRNSPEKIFVTEFSE----L-MPPTL-ISRDITQITRFYLEMK-DIIIKPLYGNG 168 (316)
Q Consensus 97 ~yi~~~~~Le~~~~~~~-viN~p~~i~~~~eKl~~~~~~~----~-~P~T~-vt~~~~~~~~f~~~~~-~vViKPl~g~~ 168 (316)
+-......++. .+.. +-=+|.+|+.+.||..+-+... + +|.+. ..+|.+++.++.++.| ||++||.+|.|
T Consensus 86 En~~fa~~~~~--~gi~fIGPs~~~i~~~gdK~~ar~~a~~~gvPv~pg~~~~~~~~~ea~~~a~~IGyPviIKas~ggG 163 (451)
T 2vpq_A 86 ENADFAELCEA--CQLKFIGPSYQSIQKMGIKDVAKAEMIKANVPVVPGSDGLMKDVSEAKKIAKKIGYPVIIKATAGGG 163 (451)
T ss_dssp TCHHHHHHHHT--TTCEESSSCHHHHHHHHSHHHHHHHHHHTTCCBCSBCSSCBSCHHHHHHHHHHHCSSEEEEETTCCT
T ss_pred CCHHHHHHHHH--CCCEECCCCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf 46677899997--5984607979999986486899999998699918997777799999999998739969999887899
Q ss_pred CCCEEEECCCCCCHHHHHHHH-----HHHCCCCCCEEECCCCCCCCCEEEEEEC---CEEEEEEEE------ECCCCCCC
Q ss_conf 344687448871158899999-----8400133400210534456826999989---988632122------04568600
Q gi|254780696|r 169 GTGVFRITLGDRNFSSLIEML-----FEKYPEPLMIQSYLPQIRDGDKRILLLN---GKPVGAVNR------IPSEVDNR 234 (316)
Q Consensus 169 G~gV~~i~~~~~~~~~~~e~~-----~~~~~~~ii~Qefi~~~~~gD~Rv~vi~---g~~v~a~~R------~~~~~~~r 234 (316)
|+|+..+. +..++...++.. ...+...+++++||+..++ +-|-+++ |.+++-..| ..++ ..
T Consensus 164 GrGmriV~-~~~el~~a~~~a~~ea~~~f~~~~v~iE~~i~~~rh--iEvqvl~D~~G~~i~l~erdCSiqrr~qk--~i 238 (451)
T 2vpq_A 164 GKGIRVAR-DEKELETGFRMTEQEAQTAFGNGGLYMEKFIENFRH--IEIQIVGDSYGNVIHLGERDCTIQRRMQK--LV 238 (451)
T ss_dssp TCSEEEES-SHHHHHHHHHHHHHHHHHHHSCCCEEEEECCCSEEE--EEEEEEECTTSCEEEEEEEEEEEEETTEE--EE
T ss_pred CCCCEEEC-CCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEE--EEEEEEEECCCCEEEEECCCCCCCCCCCC--EE
T ss_conf 88626875-824569999999999985479983899973599779--99999980899999994677677457886--69
Q ss_pred CCCCCCCCEEEE-ECCHHHH-HHHHHHHHHHHHCCCEE-EEEEEE----CC--EEEEEECCCCHHH-HHHHHHCCCCHHH
Q ss_conf 000014731110-0778999-99999999999849879-999511----78--7889836883037-8899751999899
Q gi|254780696|r 235 SNIHAGGKAELT-KLTKIDL-DICKRIGESLRERGLFF-TGIDVI----GD--YITEINVTSPTCI-REIHRNGGENVAS 304 (316)
Q Consensus 235 ~Nl~~Gg~~~~~-~lt~~~~-~i~~~~~~~L~~~gl~~-~GiDii----g~--~i~EvNvtsP~g~-~~~~~~~~~~i~~ 304 (316)
.-.|. .|+++.+ +++..+.+..+..|+.= +-|.++ ++ |++|+| |-+.-- .=-+..||+|+.+
T Consensus 239 -------EeaPs~~l~~~~r~~~~~~A~~~~~~vgy~g~gtvEfl~d~~~~~~yflEvN-~Rlqveh~vTe~vtGidlv~ 310 (451)
T 2vpq_A 239 -------EEAPSPILDDETRREMGNAAVRAAKAVNYENAGTIEFIYDLNDNKFYFMEMN-TRIQVEHPVTEMVTGIDLVK 310 (451)
T ss_dssp -------EEESCTTCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETTTTEEEEEEEE-CSCCTTHHHHHHHHCCCHHH
T ss_pred -------EECCCCCCCHHHHHHHHHHHHHHHHHCCCEEECEEEEEEECCCCCEEEEEEC-CCCCCCEEEEEEEECCCHHH
T ss_conf -------9889999999999999999999999829512120689995589958999723-77677511467231767899
Q ss_pred HHHHH
Q ss_conf 99999
Q gi|254780696|r 305 LFWDG 309 (316)
Q Consensus 305 ~i~d~ 309 (316)
.-+..
T Consensus 311 ~qi~i 315 (451)
T 2vpq_A 311 LQLQV 315 (451)
T ss_dssp HHHHH
T ss_pred HHHHH
T ss_conf 99998