HHsearch results for GI: 254780696 and protein with PDBid: 3k3p_A
>3k3p_A D-alanine--D-alanine ligase; D-alanyl-alanine synthetase, ATP-binding, cell shape, cell W biogenesis/degradation, magnesium, manganese; 2.23A {Streptococcus mutans}
Probab=99.67 E-value=4.8e-14 Score=111.03 Aligned_cols=282 Identities=13% Similarity=0.137 Sum_probs=157.8
Q ss_pred CCCCCEEEEEECCHHHCCCCCCCHH----HHHHHHHHCCCEEEE--EEHHHEEEECCEEEEEEEEEEEECCCCC--EEEE
Q ss_conf 9653318997099888484764679----999999988988999--9541248999899999999998077741--2650
Q gi|254780696|r 1 MKKIRNIAIQMNHISTVKVKEDSTF----AIALEAQVRGYQIFH--YTPDQLYMRDSKIYANTQPLSLDEKKEQ--YYSL 72 (316)
Q Consensus 1 mkk~~kI~fimDpi~~i~~~~DTT~----~Lm~eAq~RGheV~~--~~~~dL~~~~g~v~A~~~~i~i~~~~~~--~f~~ 72 (316)
|.| +||++++= ...+..|-|+ ...++..+.||+++. ++.+..++. .... ...... ....
T Consensus 35 m~k-~~I~vl~G---G~S~E~eiSl~Sg~~v~~aL~~~~y~v~~i~i~~~g~~~~-------~~~~--~~~~~~~~~~~~ 101 (383)
T 3k3p_A 35 MSK-ETLVLLYG---GRSAERDVSVLSAESVMRAINYDNFLVKTYFITQAGDFIK-------TQEF--DSQPSETDKLMT 101 (383)
T ss_dssp --C-EEEEEEEE---CSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECTTSCEEE-------EEEE--SSCCC--CCCCC
T ss_pred CCC-CEEEEEEC---CCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEE-------CCCC--CCCCCCCCCCCC
T ss_conf 579-87999969---3676429999999999997536389799999858987785-------4334--555332110034
Q ss_pred CC-----CC---CCCHHHCCEEEEEC-CCCCCHHHHHHHHHHHHHCCCC-EEECCHHHHHHCCCHHHHHHHHH-----HC
Q ss_conf 46-----44---35210063668832-8862247999999998623585-04117488752565034334543-----04
Q gi|254780696|r 73 GE-----EK---IIDLSQMDVILIRQ-DPPFNMHYITSTYLLEKINPET-LIVNNPFWIRNSPEKIFVTEFSE-----LM 137 (316)
Q Consensus 73 ~~-----~~---~~~L~~fD~i~iR~-dPp~d~~yi~~~~~Le~~~~~~-~viN~p~~i~~~~eKl~~~~~~~-----~~ 137 (316)
.. .. ..-...+|++|+-- .++- .++ ..-.+||.+ ++ ++-.++.+...|-||..+-++.+ +.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~d~vf~~lHG~~G-EdG-~iq~~le~~--gipy~Gs~~~asal~~DK~~tK~il~~~~~i~~ 177 (383)
T 3k3p_A 102 NDTIIASQKIKPSDIYEEEAVVFPVLHGPMG-EDG-SIQGFLEVL--KMPYVGTNILSSSVAMDKITTNQVLESATTIPQ 177 (383)
T ss_dssp TTSCCGGGEECGGGGCCTTCEEEEECCSTTT-SSS-HHHHHHHHT--TCCBSSCCHHHHHHHHCHHHHHHHHHHHCCCCB
T ss_pred CCHHHHHCCCCCCCCCCCCCEEEECCCCCCC-CCH-HHHHHHHHC--CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 3112210125731013567889988668665-588-999999984--998404718887767149999999987168887
Q ss_pred CCCEEECCHH----HHHHHHHHHH-HHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCEE
Q ss_conf 4310003724----5568888521-4331116885434468744887115889999984001334002105344568269
Q gi|254780696|r 138 PPTLISRDIT----QITRFYLEMK-DIIIKPLYGNGGTGVFRITLGDRNFSSLIEMLFEKYPEPLMIQSYLPQIRDGDKR 212 (316)
Q Consensus 138 P~T~vt~~~~----~~~~f~~~~~-~vViKPl~g~~G~gV~~i~~~~~~~~~~~e~~~~~~~~~ii~Qefi~~~~~gD~R 212 (316)
|+..+..+.. .+..+.++.+ |+|+||..|.+|.||.++.. ..++...++.... +...+++|+||+ +.++-
T Consensus 178 ~~~~~~~~~~~~~~~~~~i~~~lg~PvivKP~~gGsS~Gv~~V~~-~~el~~a~~~a~~-~~~~vlvEefI~---g~E~t 252 (383)
T 3k3p_A 178 VAYVALIEGEPLESKLAEVEEKLIYPVFVKPANMGSSVGISKAEN-RTDLKQAIALALK-YDSRVLIEQGVD---AREIE 252 (383)
T ss_dssp CCEEEEETTSCHHHHHHHHHHHCCSSEEEEECC------CEEESS-HHHHHHHHHHHHH-HCSEEEEEECCC---SEEEE
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCC-HHHHHHHHHHHHH-HHHHHHHHCEEC---CCCCE
T ss_conf 642123433204678999999738988997888677989722148-9999999998764-437878515651---33217
Q ss_pred EEEECCE---EEEEEEEECCCCCCC--CCCCCCC--CEEEEECCHH----HHHHHHHHHHHHHHCCC-EEEEEEEE----
Q ss_conf 9998998---863212204568600--0000147--3111007789----99999999999998498-79999511----
Q gi|254780696|r 213 ILLLNGK---PVGAVNRIPSEVDNR--SNIHAGG--KAELTKLTKI----DLDICKRIGESLRERGL-FFTGIDVI---- 276 (316)
Q Consensus 213 v~vi~g~---~v~a~~R~~~~~~~r--~Nl~~Gg--~~~~~~lt~~----~~~i~~~~~~~L~~~gl-~~~GiDii---- 276 (316)
+-|+++. ++.....++..+.|. .....+. ...+..++++ .+++|.++.+.| |+ .++.||++
T Consensus 253 v~v~~~~~~~~~~~~e~i~~~~~~~~~~~~~~~~~~~~~pa~~~~~l~~~i~~~A~ka~~~L---g~~g~~RiDf~ld~d 329 (383)
T 3k3p_A 253 VGILGNTDVKTTLPGEIVKDVAFYDYEAKYIDNKITMAIPAEIDPVIVEKMRDYAATAFRTL---GCCGLSRCDFFLTED 329 (383)
T ss_dssp EEEEESSSCEECCCEEEC-----------------CEESSCCCCHHHHHHHHHHHHHHHHHT---TCCEEEEEEEEECTT
T ss_pred EEEEECCCCEEEEECCCCCCCCCCCHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH---CCCCEEEEEEEEECC
T ss_conf 88872477505520010024665330013416874445776657999999999999999984---995279899999389
Q ss_pred C-CEEEEEECCCCH-----HHHHHHHHCCCCHHHHHHH
Q ss_conf 7-878898368830-----3788997519998999999
Q gi|254780696|r 277 G-DYITEINVTSPT-----CIREIHRNGGENVASLFWD 308 (316)
Q Consensus 277 g-~~i~EvNvtsP~-----g~~~~~~~~~~~i~~~i~d 308 (316)
| .|++||| |.|| .+...-+..|++.++.+-.
T Consensus 330 g~~y~lEvN-t~PGlt~~S~~p~~a~~~G~sy~~Ll~~ 366 (383)
T 3k3p_A 330 GKVYLNELN-TMPGFTQWSMYPLLWENMGLSYSVLIEE 366 (383)
T ss_dssp CCEEEEEEE-SSCCCC--CHHHHHHHHTTCCHHHHHHH
T ss_pred CCEEEEEEE-CCCCCCCCCHHHHHHHHHCCCHHHHHHH
T ss_conf 968999861-9899886678999999809999999999