RPSBLAST alignment of GI: 254780696 and protein with PDBid: 1uc8
>1uc8_A LYSX, lysine biosynthesis enzyme; alpha-aminoadipate pathway, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: c.30.1.6 d.142.1.7 PDB: 1uc9_A* Length = 280
Score = 44.9 bits (105), Expect = 2e-05
Identities = 41/274 (14%), Positives = 79/274 (28%), Gaps = 45/274 (16%)
Query: 26 AIALEAQVRGYQIFHYTPDQLYMRDSKIYANTQPLSLDEKKEQYYSLGEEKIIDLSQMDV 85
+ A+ G +Y P+ L E+ +L + V
Sbjct: 15 MLFERAEALGLPYKK------------VYVPALPMVLGER-----------PKELEGVTV 51
Query: 86 ILIRQDPPFNMHYITSTYLLEKINPETLIVNNPFWIRNSPEKIFVTEFSE-----LMPPT 140
L R I +VN P I +K +
Sbjct: 52 ALERCVSQSRGLAAARYLTALGI----PVVNRPEVIEACGDKWATSVALAKAGLPQPKTA 107
Query: 141 LISRDITQITRFYLEMKDIIIKPLYGNGGTG--VFRITLGDRNFSSLIEMLFEKYPEPLM 198
L + + +++KP+ G+ G +L +
Sbjct: 108 LATDREEALRLMEAFGYPVVLKPVIGSWGRLXXXXXXXXXXXXXXXXXXVLGGFQHQLFY 167
Query: 199 IQSYLPQIRDGDKRILLLNGKPVGAVNRIPSEVDNRSNIHAGGKAELTKLTKIDLDICKR 258
IQ Y+ + D R+ ++ + + A +N GG+AE LT+ + +
Sbjct: 168 IQEYVEK-PGRDIRVFVVGERAIAA--IYRRSAHWITNTARGGQAENCPLTEEVARLSVK 224
Query: 259 IGESLRERGLFFTGIDVI----GDYITEINVTSP 288
E++ G +D+ G + E+N +
Sbjct: 225 AAEAV---GGGVVAVDLFESERGLLVNEVN-HTM 254