HHsearch alignment for GI: 254780697 and conserved domain: PRK00567
>PRK00567 mscL large-conductance mechanosensitive channel; Reviewed.
Probab=100.00 E-value=0 Score=311.36 Aligned_cols=127 Identities=43% Similarity=0.801 Sum_probs=114.6
Q ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHHCCCCCCHH
Q ss_conf 78999999983666999999999998999999999976666778750465674432576276666311232101660000
Q gi|254780697|r 7 VFNEFKKFIARGNVIDLSVGIIIGGAFNRVVQSIVEDIMMPLVGCVMGNGTDFSNYFLPLSSEIKSSLISEARKQGAVFA 86 (141)
Q Consensus 7 mlkeFK~Fi~rGNVidLAVavIIG~AF~~iV~slv~diimPlIg~i~g~g~~f~~~~~~l~~~~~~~~~~~~~~~~~~i~ 86 (141)
T Consensus 1 ml~eFK~Fi~rGNviDLAVgvIiG~AF~~iV~slv~~ii~PlI~~~~g-~~~~~~l~~~l~~~~-------~~~~~~~i~ 72 (134)
T PRK00567 1 MLKEFKEFAMRGNVVDLAVGVIIGAAFGKIVTSLVDDIIMPPIGLLIG-GVDFSNLAIVLKEAQ-------GDAPAVTIN 72 (134)
T ss_pred CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCHHHCEEEECCCC-------CCCCCCEEC
T ss_conf 917899999816789999999999999999999999999888998617-877556023314642-------345541001
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCHHHHHHHHHHHHHCC
Q ss_conf 9899999999999999999999999998412348---898683569999999996409
Q gi|254780697|r 87 YGSFASVLVNFFILAGVVFVLIQFMNKLVKQTEN---VKNPPAEVQLLTEIRDLLQKN 141 (141)
Q Consensus 87 yG~fl~aiI~FlIiA~viFlivk~~nk~~~~~e~---~~~~~~e~~LL~EIRDlLkkn 141 (141)
T Consensus 73 yG~fl~aiInFlIia~vvFliVk~~nk~~~k~~~~~~~~~~~~e~~lL~EIRDlL~~~ 130 (134)
T PRK00567 73 YGVFINAVIDFLIIAFAIFLVVKLINKLRRKKEEPAAPPAPTTEEVLLTEIRDLLKAQ 130 (134)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 4099999999999999999999999998624578999998685899999999999844