HHsearch alignment for GI: 254780698 and conserved domain: COG2367
>COG2367 PenP Beta-lactamase class A [Defense mechanisms].
Probab=99.38 E-value=5e-12 Score=90.65 Aligned_cols=213 Identities=23% Similarity=0.219 Sum_probs=139.2
Q ss_pred CCCEEEEECCCCEEEEECCCCCCCC-CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCC--CCCCCCEEEEE
Q ss_conf 6319999988962831136998888-13879999999999755589885541115367612454432--25788568830
Q gi|254780698|r 53 KYSSIVIDVNKNQMTGFKQDEPRYP-ASLTKMMTLYIIFEYLQSKKLHLNTQIPVSKTAATQNPSKL--YLKEKTYFTTE 129 (336)
Q Consensus 53 ~~sAiv~D~~tG~ILy~Kn~~~~~P-ASlTKlMTa~v~le~i~~g~i~~~~~v~is~~a~~~~~s~~--~l~~g~~~tv~ 129 (336)
T Consensus 64 ~~~~~v~d~~t~-~~~~~n~~~~fp~aSt~K~~v~~a~l~~v~~G~~~l~e~~ti~~-d~~~~~s~~~~~~~~g~~~t~~ 141 (329)
T COG2367 64 RVGVYVLDVDTG-ELIAINGDERFPAASTIKLPVLAALLEQVDAGRIGLDERLTITK-DDRVGGSGVLQYLVGGGGSTLR 141 (329)
T ss_pred EEEEEEEECCCC-CEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH-HHHCCCCCHHEEECCCCCEEHH
T ss_conf 267999966887-31311577521257899999999999971457557554201043-3322576111131578835799
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEECCC--------CCCCCC----CCCCHHHHHHH
Q ss_conf 245788998777776545542010057899988876887266122200245--------433334----45301345555
Q gi|254780698|r 130 QGILALITRSANDVSTAFGEFISGSEKKFAILMSNKAKKIGMQNTIYKNAS--------GLHDKN----QITTARDQAIL 197 (336)
Q Consensus 130 dLl~~lli~S~NdAa~alAe~i~Gs~~~Fv~~MN~~A~~lGl~~t~f~np~--------Gl~~~~----~~tta~Dla~l 197 (336)
T Consensus 142 el~~~mi~~SDNtAtnmLi~rlg~~-----~~v~~~l~~~Gl~~t~~~~~~~~~ln~~~~~~d~~~~~~~~t~a~~~~~L 216 (329)
T COG2367 142 ELLTKMITASDNTATNMLIERLGGP-----KALNEWLRSIGLPNTRLRRPYMPDLNRFNGPYDPRDSGKTTTPADDAATL 216 (329)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHCCH-----HHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 9996522214028889999993581-----99999999818832231000266200266776633355656878999999
Q ss_pred HHHHCCCCEEEEEEE-EEEEEEECCEEEEEEC---HHC---CCCCCCEEEEECCCCCCCCEEEEEEEECCE-EEEEEEEC
Q ss_conf 542013620467761-1565434786997210---102---576870056522423337179999997897-99999817
Q gi|254780698|r 198 GILLRKNFPQYYKYF-SIRKFRYRNRIITNHN---KLL---NKMHNIDGIKTGYTRNSGFNIVTSLRYKDD-PIVAVVMG 269 (336)
Q Consensus 198 ~~~~~~~~p~~~~~~-s~~~~~~~~~~~~n~N---~lL---~~~~g~~G~KTG~T~~AG~clv~~a~~~g~-~lI~Vvlg 269 (336)
T Consensus 217 ~q~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~~~~~ia~K~G~~l~~~~~D~~~~~~~~~~~~v~~~~~ 296 (329)
T COG2367 217 LQLILGAVLSPSDRATGLSGYLAEWALLANTIGRDWLLRAGLPFDWAIAHKTGTGLGGTANDVGIIWAPVPKPIVAAVIG 296 (329)
T ss_pred HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHCCCCCCHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEEEEE
T ss_conf 99873355785422344058888789986266864320103874422304656346788776378856988448999973
Q ss_pred CCC
Q ss_conf 998
Q gi|254780698|r 270 MPT 272 (336)
Q Consensus 270 ~~s 272 (336)
T Consensus 297 ~~~ 299 (329)
T COG2367 297 ERP 299 (329)
T ss_pred CCC
T ss_conf 476