HHsearch alignment for GI: 254780698 and conserved domain: TIGR02074
>TIGR02074 PBP_1a_fam penicillin-binding protein, 1A family; InterPro: IPR011816 Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of bifunctional transglycosylase/transpeptidase penicillin-binding proteins (PBP). In the Proteobacteria, this family includes PBP 1A but not the paralogous PBP 1B (IPR011813 from INTERPRO). This family also includes related proteins, often designated PBP 1A, from other bacterial lineages.; GO: 0008233 peptidase activity, 0016763 transferase activity transferring pentosyl groups, 0009252 peptidoglycan biosynthetic process, 0046677 response to antibiotic.
Probab=96.30 E-value=0.031 Score=32.23 Aligned_cols=140 Identities=12% Similarity=0.047 Sum_probs=104.3
Q ss_pred CCCEEEEECCCCEEEE-------EC------C-CCC--CCCCHHHHHHHHHHHHHHHHCC-CCCCCCCCCCCHHHHC---
Q ss_conf 6319999988962831-------13------6-998--8881387999999999975558-9885541115367612---
Q gi|254780698|r 53 KYSSIVIDVNKNQMTG-------FK------Q-DEP--RYPASLTKMMTLYIIFEYLQSK-KLHLNTQIPVSKTAAT--- 112 (336)
Q Consensus 53 ~~sAiv~D~~tG~ILy-------~K------n-~~~--~~PASlTKlMTa~v~le~i~~g-~i~~~~~v~is~~a~~--- 112 (336)
T Consensus 368 q~A~V~~D~~TG~v~A~VGG~dy~~~v~~~fNRAT~a~RQPGStfKPf~VY~~--Ale~G~~~~~~~~~~D~P~~~~~~~ 445 (700)
T TIGR02074 368 QAALVAIDPKTGAVRALVGGRDYGENVSSQFNRATQAKRQPGSTFKPFAVYAA--ALEKGLKYTPASILDDEPITYSGDP 445 (700)
T ss_pred CEEEEEEECCCCEEEEEECCEECCCCCCCCCCHHEECCCCCCCHHHHHHHHHH--HHHHHCCCCCCCEEEECCEEECCCC
T ss_conf 50068984589768998746123777644642010002686512657999999--9985043470103330334535888
Q ss_pred -CCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC--C-----EECCCCCCC
Q ss_conf -45443225788568830245788998777776545542010057899988876887266122--2-----002454333
Q gi|254780698|r 113 -QNPSKLYLKEKTYFTTEQGILALITRSANDVSTAFGEFISGSEKKFAILMSNKAKKIGMQNT--I-----YKNASGLHD 184 (336)
Q Consensus 113 -~~~s~~~l~~g~~~tv~dLl~~lli~S~NdAa~alAe~i~Gs~~~Fv~~MN~~A~~lGl~~t--~-----f~np~Gl~~ 184 (336)
T Consensus 446 ~~G~~w~P~Ny~g~y~G~vtl~~ALa~S~N~pAv~l~~~vG-----~~~~~~~~~~~~Gi~~~~~~E~T~~~~~s~ALG~ 520 (700)
T TIGR02074 446 GNGGGWEPKNYGGKYRGNVTLRQALAQSINIPAVKLLDEVG-----FLDKVVALAKRFGITSPELPEKTLDPVLSLALGT 520 (700)
T ss_pred CCCCCCCEECCCCCEEECCCHHHHHHHCCCHHHHHHHHHHC-----CHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECC
T ss_conf 98895030006881461332999975122389999998707-----8279999999708878766665888756501066
Q ss_pred CC--CCCCHHHHHHHHH
Q ss_conf 34--4530134555554
Q gi|254780698|r 185 KN--QITTARDQAILGI 199 (336)
Q Consensus 185 ~~--~~tta~Dla~l~~ 199 (336)
T Consensus 521 ~e~~~Gv~pl~~A~AYa 537 (700)
T TIGR02074 521 VESRKGVSPLEMASAYA 537 (700)
T ss_pred CCCCCCCCHHHHHHHHH
T ss_conf 54344756899998767