HHsearch alignment for GI: 254780698 and conserved domain: TIGR02074

>TIGR02074 PBP_1a_fam penicillin-binding protein, 1A family; InterPro: IPR011816 Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of bifunctional transglycosylase/transpeptidase penicillin-binding proteins (PBP). In the Proteobacteria, this family includes PBP 1A but not the paralogous PBP 1B (IPR011813 from INTERPRO). This family also includes related proteins, often designated PBP 1A, from other bacterial lineages.; GO: 0008233 peptidase activity, 0016763 transferase activity transferring pentosyl groups, 0009252 peptidoglycan biosynthetic process, 0046677 response to antibiotic.
Probab=96.30  E-value=0.031  Score=32.23  Aligned_cols=140  Identities=12%  Similarity=0.047  Sum_probs=104.3

Q ss_pred             CCCEEEEECCCCEEEE-------EC------C-CCC--CCCCHHHHHHHHHHHHHHHHCC-CCCCCCCCCCCHHHHC---
Q ss_conf             6319999988962831-------13------6-998--8881387999999999975558-9885541115367612---
Q gi|254780698|r   53 KYSSIVIDVNKNQMTG-------FK------Q-DEP--RYPASLTKMMTLYIIFEYLQSK-KLHLNTQIPVSKTAAT---  112 (336)
Q Consensus        53 ~~sAiv~D~~tG~ILy-------~K------n-~~~--~~PASlTKlMTa~v~le~i~~g-~i~~~~~v~is~~a~~---  112 (336)
T Consensus       368 q~A~V~~D~~TG~v~A~VGG~dy~~~v~~~fNRAT~a~RQPGStfKPf~VY~~--Ale~G~~~~~~~~~~D~P~~~~~~~  445 (700)
T TIGR02074       368 QAALVAIDPKTGAVRALVGGRDYGENVSSQFNRATQAKRQPGSTFKPFAVYAA--ALEKGLKYTPASILDDEPITYSGDP  445 (700)
T ss_pred             CEEEEEEECCCCEEEEEECCEECCCCCCCCCCHHEECCCCCCCHHHHHHHHHH--HHHHHCCCCCCCEEEECCEEECCCC
T ss_conf             50068984589768998746123777644642010002686512657999999--9985043470103330334535888


Q ss_pred             -CCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC--C-----EECCCCCCC
Q ss_conf             -45443225788568830245788998777776545542010057899988876887266122--2-----002454333
Q gi|254780698|r  113 -QNPSKLYLKEKTYFTTEQGILALITRSANDVSTAFGEFISGSEKKFAILMSNKAKKIGMQNT--I-----YKNASGLHD  184 (336)
Q Consensus       113 -~~~s~~~l~~g~~~tv~dLl~~lli~S~NdAa~alAe~i~Gs~~~Fv~~MN~~A~~lGl~~t--~-----f~np~Gl~~  184 (336)
T Consensus       446 ~~G~~w~P~Ny~g~y~G~vtl~~ALa~S~N~pAv~l~~~vG-----~~~~~~~~~~~~Gi~~~~~~E~T~~~~~s~ALG~  520 (700)
T TIGR02074       446 GNGGGWEPKNYGGKYRGNVTLRQALAQSINIPAVKLLDEVG-----FLDKVVALAKRFGITSPELPEKTLDPVLSLALGT  520 (700)
T ss_pred             CCCCCCCEECCCCCEEECCCHHHHHHHCCCHHHHHHHHHHC-----CHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECC
T ss_conf             98895030006881461332999975122389999998707-----8279999999708878766665888756501066


Q ss_pred             CC--CCCCHHHHHHHHH
Q ss_conf             34--4530134555554
Q gi|254780698|r  185 KN--QITTARDQAILGI  199 (336)
Q Consensus       185 ~~--~~tta~Dla~l~~  199 (336)
T Consensus       521 ~e~~~Gv~pl~~A~AYa  537 (700)
T TIGR02074       521 VESRKGVSPLEMASAYA  537 (700)
T ss_pred             CCCCCCCCHHHHHHHHH
T ss_conf             54344756899998767