HHsearch alignment for GI: 254780698 and conserved domain: pfam00768
>pfam00768 Peptidase_S11 D-alanyl-D-alanine carboxypeptidase.
Probab=100.00 E-value=0 Score=468.82 Aligned_cols=226 Identities=31% Similarity=0.463 Sum_probs=211.1
Q ss_pred CCCCCCCCCEEEEECCCCEEEEECCCCCC-CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHC----CCCCCCCCC
Q ss_conf 00148763199999889628311369988-8813879999999999755589885541115367612----454432257
Q gi|254780698|r 47 ELHAKPKYSSIVIDVNKNQMTGFKQDEPR-YPASLTKMMTLYIIFEYLQSKKLHLNTQIPVSKTAAT----QNPSKLYLK 121 (336)
Q Consensus 47 ~~~~~~~~sAiv~D~~tG~ILy~Kn~~~~-~PASlTKlMTa~v~le~i~~g~i~~~~~v~is~~a~~----~~~s~~~l~ 121 (336)
T Consensus 6 ~~P~i~A~saiv~D~~tg~iL~~kn~~~~~~pAS~TKlMTa~v~le~~~~~~~~~~~~v~is~~~~~~~~~~~~s~~~l~ 85 (241)
T pfam00768 6 SAPEIAAKSAILVDYNTGKVLYEKNADQVRPIASITKLMTAYVVLEALKAGKLKEDDPVTISEYAYALGNFRGSSNMFLK 85 (241)
T ss_pred CCCCCCCEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEECCHHHHHHCCCCCCCEEEEC
T ss_conf 99856512999999999979000690998177899999999999997562898854442101889986378887346534
Q ss_pred CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 88568830245788998777776545542010057899988876887266122200245433334453013455555420
Q gi|254780698|r 122 EKTYFTTEQGILALITRSANDVSTAFGEFISGSEKKFAILMSNKAKKIGMQNTIYKNASGLHDKNQITTARDQAILGILL 201 (336)
Q Consensus 122 ~g~~~tv~dLl~~lli~S~NdAa~alAe~i~Gs~~~Fv~~MN~~A~~lGl~~t~f~np~Gl~~~~~~tta~Dla~l~~~~ 201 (336)
T Consensus 86 ~G~~~tv~dLl~~lll~S~NdAA~aLA~~v~Gs~~~Fv~~MN~~A~~LGm~~T~F~np~GL~~~~~~sTA~Dla~l~~~~ 165 (241)
T pfam00768 86 PGDKVTVRDLLRGLLVSSGNDAAVALAEKIAGSEKAFVKMMNAKAKQLGLKNTRFVNPTGLDNHGQYSSARDLAILARAL 165 (241)
T ss_pred CCCEEEHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEECHHHHHHHHHHH
T ss_conf 89998899999999875645999999998458299999999999998199998666687777888666799999999999
Q ss_pred CCCCEEEEEEEEEEEEEECC----EEEEEECHHCCCCC-CCEEEEECCCCCCCCEEEEEEEECCEEEEEEEECCCC
Q ss_conf 13620467761156543478----69972101025768-7005652242333717999999789799999817998
Q gi|254780698|r 202 RKNFPQYYKYFSIRKFRYRN----RIITNHNKLLNKMH-NIDGIKTGYTRNSGFNIVTSLRYKDDPIVAVVMGMPT 272 (336)
Q Consensus 202 ~~~~p~~~~~~s~~~~~~~~----~~~~n~N~lL~~~~-g~~G~KTG~T~~AG~clv~~a~~~g~~lI~Vvlg~~s 272 (336)
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~NtN~ll~~~~~~v~G~KTG~T~~AG~clv~~a~~~g~~~I~VvLgs~s 241 (241)
T pfam00768 166 IKDLPEVLSITKEKSATFNTPIYKINWMNTNGLLYRKGGNVDGLKTGYTKEAGYCLVATATEGGMRVISVVLNADT 241 (241)
T ss_pred HHHCHHHEEEEEEEEEEECCCCCEEEEECCCCHHHCCCCCEEEEEEEEECCCCCEEEEEEEECCEEEEEEEECCCC
T ss_conf 8749584088877899974787358997379510057985799995253166645999999999899999949999