HHsearch alignment for GI: 254780698 and conserved domain: pfam02113
>pfam02113 Peptidase_S13 D-Ala-D-Ala carboxypeptidase 3 (S13) family.
Probab=97.93 E-value=0.00011 Score=46.90 Aligned_cols=179 Identities=13% Similarity=0.089 Sum_probs=111.5
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHC------CHHH
Q ss_conf 9999999997555898855411153676124544322578856883024578899877777654554201------0057
Q gi|254780698|r 83 MMTLYIIFEYLQSKKLHLNTQIPVSKTAATQNPSKLYLKEKTYFTTEQGILALITRSANDVSTAFGEFIS------GSEK 156 (336)
Q Consensus 83 lMTa~v~le~i~~g~i~~~~~v~is~~a~~~~~s~~~l~~g~~~tv~dLl~~lli~S~NdAa~alAe~i~------Gs~~ 156 (336)
T Consensus 190 ~~~~~~f~~~L~~~Gi~v~~~~~~~~----~~~~~~~l~~~~S~pL~~iv~~m~k~S~N~~AE~L~~~lg~~~~~~~s~~ 265 (383)
T pfam02113 190 GYAGAIFAKALALQGITVSGDIGRAG----TPQSARVLAVHQSAPLSDLLKKMMKKSDNLIAESLFREIGVAIKRPGSFE 265 (383)
T ss_pred HHHHHHHHHHHHHCCCEEECCEEECC----CCCCCEEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHH
T ss_conf 99999999999976987806354246----89985699999697999999999741856999999999998627998889
Q ss_pred HHHHHHHHHHHHHCCCC--CCEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEEEEEECCEEEEEE---CHHC
Q ss_conf 89998887688726612--220024543333445301345555542013620467761156543478699721---0102
Q gi|254780698|r 157 KFAILMSNKAKKIGMQN--TIYKNASGLHDKNQITTARDQAILGILLRKNFPQYYKYFSIRKFRYRNRIITNH---NKLL 231 (336)
Q Consensus 157 ~Fv~~MN~~A~~lGl~~--t~f~np~Gl~~~~~~tta~Dla~l~~~~~~~~p~~~~~~s~~~~~~~~~~~~n~---N~lL 231 (336)
T Consensus 266 ~g~~~v~~~L~~~gi~~~~~~l~DGSGLSr~-n~is~~~l~~lL~~~~~~-~~~~~~~~sLPvaG~dGTL~~r~~~~~~~ 343 (383)
T pfam02113 266 AGADAVRSILSTAGIDTANLVLRDGSGLSRH-NLVTAATLAQLLQAIADQ-PALQALLDSLPVAGESGTLVGGTLRNRFK 343 (383)
T ss_pred HHHHHHHHHHHHCCCCCCCCEEECCCCCCCC-CCCCHHHHHHHHHHHHHC-CCHHHHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf 9999999999974999556478448988733-454999999999999869-43889998398268888555555555445
Q ss_pred C-CCCCCEEEEECCCCCCCCEEEEEEE-ECCEEEEEEEE
Q ss_conf 5-7687005652242333717999999-78979999981
Q gi|254780698|r 232 N-KMHNIDGIKTGYTRNSGFNIVTSLR-YKDDPIVAVVM 268 (336)
Q Consensus 232 ~-~~~g~~G~KTG~T~~AG~clv~~a~-~~g~~lI~Vvl 268 (336)
T Consensus 344 ~~~~~G~v~aKTGTL~-~V~sLaGyv~~~~G~~l~Fsi~ 381 (383)
T pfam02113 344 GTPAVGKVRAKTGSLT-GVYSLAGYVTTDSGRKLAFSFI 381 (383)
T ss_pred CCCCCCEEEEEEEECC-CCEEEEEEEECCCCCEEEEEEE
T ss_conf 7775675999985006-9579479999799899999999