HHsearch results for GI: 254780698 and protein with PDBid: 1w79_A
>1w79_A D-alanyl-D-alanine carboxypeptidase; penicillin-binding, peptidoglycan, transpeptidase, antibiotic resistance, hydrolase; 1.8A {Actinomadura SP} SCOP: e.3.1.3 PDB: 1w8q_A 1w8y_A* 2vgj_A* 2vgk_A* 2wke_A*
Probab=99.12 E-value=1.1e-09 Score=75.32 Aligned_cols=134 Identities=13% Similarity=0.119 Sum_probs=90.7
Q ss_pred EEEHHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHCCCC--CCEECCCCCCCCCCCCCHHHHHHHH
Q ss_conf 83024578899877777654554201------005789998887688726612--2200245433334453013455555
Q gi|254780698|r 127 TTEQGILALITRSANDVSTAFGEFIS------GSEKKFAILMSNKAKKIGMQN--TIYKNASGLHDKNQITTARDQAILG 198 (336)
Q Consensus 127 tv~dLl~~lli~S~NdAa~alAe~i~------Gs~~~Fv~~MN~~A~~lGl~~--t~f~np~Gl~~~~~~tta~Dla~l~ 198 (336)
++.++++.|+-.|.|--|..|...++ |+.+.-...+.+..+++|+.. .++.|.+||...+ ..|+++|..+.
T Consensus 286 pL~~il~~mlk~SdN~~AE~L~~~lg~~~~~~~s~~~~~~~~~~~l~~~gi~~~~~~l~DGSGLSr~n-riSp~~l~~lL 364 (489)
T 1w79_A 286 ELSEILVPFMKFSNNGHAEMLVKSIGQETAGAGTWDAGLVGVEEALSGLGVDTAGLVLNDGSGLSRGN-LVTADTVVDLL 364 (489)
T ss_dssp EHHHHHHHHHHHTCHHHHHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHTTCCCTTCBCSCSSSCSTTC-BBCHHHHHHHH
T ss_pred CHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCC-CCCHHHHHHHH
T ss_conf 89999999986366599999999999974489977899999999998658985674770588788666-65999999999
Q ss_pred HHHCCCCEEEEEEEEEEEEEECC-------EEEEEECHHCC-CCCCCEEEEECCCCCCCCEEEEEEEE-CCEEEEEEEE
Q ss_conf 42013620467761156543478-------69972101025-76870056522423337179999997-8979999981
Q gi|254780698|r 199 ILLRKNFPQYYKYFSIRKFRYRN-------RIITNHNKLLN-KMHNIDGIKTGYTRNSGFNIVTSLRY-KDDPIVAVVM 268 (336)
Q Consensus 199 ~~~~~~~p~~~~~~s~~~~~~~~-------~~~~n~N~lL~-~~~g~~G~KTG~T~~AG~clv~~a~~-~g~~lI~Vvl 268 (336)
.++..+ |.+..+.+. ..+.+ .++. |++.. .-.|..=.|||+.+ .-.||.+.... +|+ ++.++|
T Consensus 365 ~~~~~~-~~~~~~~~s--LPiaG~~~~~vdGTL~--~R~~~~~~~g~v~aKTGTL~-~V~sLaGyv~~~~G~-l~Fsi~ 436 (489)
T 1w79_A 365 GQAGSA-PWAQTWSAS--LPVAGESDPFVGGTLA--NRMRGTAAEGVVEAKTGTMS-GVSALSGYVPGPEGE-LAFSIV 436 (489)
T ss_dssp HHHHTS-TTHHHHHHH--SCBTTCSSHHHHGGGT--TSSTTSTTTTTCEEECCEET-TEEEEEEEECCTTCC-EEEEEE
T ss_pred HHHHHC-CCHHHHHHH--CCCCCCCCCCCCCCHH--HHCCCCCCCCEEEEEEEEEC-CCEEEEEEEECCCCC-EEEEEE
T ss_conf 998859-317899973--8857887777787556--64247876784999985006-947838999969998-999999