HHsearch results for GI: 254780698 and protein with PDBid: 1z6f_A
>1z6f_A Penicillin-binding protein 5; peptidoglycan synthesis, DD- carboxypeptidase, hydrolase, boronic acid; HET: BO9; 1.60A {Escherichia coli} SCOP: b.105.1.1 e.3.1.1 PDB: 1nzu_A 1nzo_A* 3beb_A* 3bec_A* 1nj4_A 1hd8_A 1sdn_A
Probab=100.00 E-value=0 Score=507.01 Aligned_cols=254 Identities=28% Similarity=0.400 Sum_probs=237.7
Q ss_pred CCCCCCCCCCEEEEECCCCEEEEECCCCCC-CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHC------CCCCCC
Q ss_conf 100148763199999889628311369988-8813879999999999755589885541115367612------454432
Q gi|254780698|r 46 SELHAKPKYSSIVIDVNKNQMTGFKQDEPR-YPASLTKMMTLYIIFEYLQSKKLHLNTQIPVSKTAAT------QNPSKL 118 (336)
Q Consensus 46 ~~~~~~~~~sAiv~D~~tG~ILy~Kn~~~~-~PASlTKlMTa~v~le~i~~g~i~~~~~v~is~~a~~------~~~s~~ 118 (336)
+.++...+.||||+|++||+|||+||++++ +|||+|||||+|+++|++++|++++++.|+++++++. .++|.+
T Consensus 10 p~~P~i~a~aaiv~d~~tG~iL~~kn~~~~~~~ASlTKlMTa~v~le~i~~g~l~~~~~v~vs~~a~~~~~~~~~~~s~~ 89 (363)
T 1z6f_A 10 PGVPQIDAESYILIDYNSGKVLAEQNADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVTIGNDAWATGNPVFKGSSLM 89 (363)
T ss_dssp CCCCCCSEEEEEEEETTTCCEEEEESTTCCBCCGGGHHHHHHHHHHHHHHTTSCCTTCEEECCGGGCGGGCGGGTTSCCC
T ss_pred CCCCCCCCEEEEEEECCCCCCHHEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHCCCCCCCCCCC
T ss_conf 99897652099999999998900069099818689999999999999987399985656983389985236633587511
Q ss_pred CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCHHHHHHHH
Q ss_conf 25788568830245788998777776545542010057899988876887266122200245433334453013455555
Q gi|254780698|r 119 YLKEKTYFTTEQGILALITRSANDVSTAFGEFISGSEKKFAILMSNKAKKIGMQNTIYKNASGLHDKNQITTARDQAILG 198 (336)
Q Consensus 119 ~l~~g~~~tv~dLl~~lli~S~NdAa~alAe~i~Gs~~~Fv~~MN~~A~~lGl~~t~f~np~Gl~~~~~~tta~Dla~l~ 198 (336)
++++|++++++|||+++|+.|+||||++|||+++|++++||++||++|++|||++|||.|||||++++|+|||+|+++++
T Consensus 90 ~l~~ge~~tv~dLl~~lli~SaNdAA~aLAe~~~Gs~~~Fv~~MN~kA~elG~~~T~f~np~Gl~~~~~~tta~Dla~l~ 169 (363)
T 1z6f_A 90 FLKPGMQVPVSQLIRGINLQSGNDACVAMADFAAGSQDAFVGLMNSYVNALGLKNTHFQTVHGLDADGQYSSARDMALIG 169 (363)
T ss_dssp CCCTTCEEEHHHHHHHHHTTCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHTTCSSCBCCSSSCCCCTTCBBCHHHHHHHH
T ss_pred CCCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHH
T ss_conf 34589899999999998765643999999986389999999999999999605665044368887246737789999889
Q ss_pred HHHCCCCEEEEEEEEEEEEEECCEEEEEECHHCC-CCCCCEEEEECCCCCCCCEEEEEEEECCEEEEEEEECCCCHHHHH
Q ss_conf 4201362046776115654347869972101025-768700565224233371799999978979999981799878999
Q gi|254780698|r 199 ILLRKNFPQYYKYFSIRKFRYRNRIITNHNKLLN-KMHNIDGIKTGYTRNSGFNIVTSLRYKDDPIVAVVMGMPTSQERD 277 (336)
Q Consensus 199 ~~~~~~~p~~~~~~s~~~~~~~~~~~~n~N~lL~-~~~g~~G~KTG~T~~AG~clv~~a~~~g~~lI~Vvlg~~s~~~R~ 277 (336)
+++++++|.+..+.+.+.+++....+.|+|.+|. .++|++|+|||||++||+||+++++|+|+|+|+||||+++...||
T Consensus 170 ~~~~~~~p~~~~~~~~~~~~~~~~~~~n~n~~l~~~~~~~~G~KTG~t~~AG~~lv~~a~~~g~~~i~Vvlg~~~~~~r~ 249 (363)
T 1z6f_A 170 QALIRDVPNEYSIYKEKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTDKAGYNLVASATEGQMRLISAVMGGRTFKGRE 249 (363)
T ss_dssp HHHHHHCHHHHGGGGCCEEEETTEEEECSCGGGGCTTSEEEEEEEEEETTTEEEEEEEEEETTEEEEEEEEEECCSTTTT
T ss_pred HHHHCCCCCCEEEEEEEEEECCCCEEECCCHHHHCCCCCCEEEEEEEECCCCCEEEEEEEECCCEEEEEEECCCCHHHHH
T ss_conf 99845886200245677650378411146334435577760699988713586457789968963899998999856779
Q ss_pred HHHHHHHHHHHCCCCCEEEEEC
Q ss_conf 9999999998401540343204
Q gi|254780698|r 278 QKALELITSFLEKKTLKHQQTH 299 (336)
Q Consensus 278 ~~~~~Ll~~~f~~~~~~~~~~~ 299 (336)
.|+++|++|+|++|..+.....
T Consensus 250 ~d~~~L~~~~f~~~~~~~~~~~ 271 (363)
T 1z6f_A 250 AESKKLLTWGFRFFETVNPLKV 271 (363)
T ss_dssp HHHHHHHHHHHHHEEEEEEECT
T ss_pred HHHHHHHHHHHHHEEEEEEECC
T ss_conf 9999999999864089963026