HHsearch results for GI: 254780698 and protein with PDBid: 2iwb_A
>2iwb_A Methicillin resistance MECR1 protein; antibiotic resistance, bacterial antibiotic resistance, methicillin resistance, beta-lactamic antibiotics, MRSA; 1.8A {Staphylococcus aureus} PDB: 2iwc_A* 2iwd_A*
Probab=98.89 E-value=1.4e-08 Score=68.71 Aligned_cols=190 Identities=12% Similarity=0.075 Sum_probs=111.5
Q ss_pred CCEEEEECCCCEEEEEC-C-CCCCC-CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEEH
Q ss_conf 31999998896283113-6-99888-813879999999999755589885541115367612454432257885688302
Q gi|254780698|r 54 YSSIVIDVNKNQMTGFK-Q-DEPRY-PASLTKMMTLYIIFEYLQSKKLHLNTQIPVSKTAATQNPSKLYLKEKTYFTTEQ 130 (336)
Q Consensus 54 ~sAiv~D~~tG~ILy~K-n-~~~~~-PASlTKlMTa~v~le~i~~g~i~~~~~v~is~~a~~~~~s~~~l~~g~~~tv~d 130 (336)
-+++++|.+||+++.-+ + ..+++ |+|+=|++|+..+|| .|.++.++.+....... ..+-.-...++
T Consensus 24 G~~v~~d~~tg~~~~~n~~~~~~~y~PGStfK~~t~~aaLe---~g~~~~~~~~~~~~~~~-----~~~~~~~g~~~--- 92 (246)
T 2iwb_A 24 GSFVLYNEREQAYSIYNEPESKQRYSPNSTYKIYLALMAFD---QNLLSLNHTEQQWDKHQ-----YPFKEWNQDQN--- 92 (246)
T ss_dssp EEEEEEETTTTEEEEESHHHHTBCBCCGGGGHHHHHHHHHH---TTSSBTTBCCBCCCCCC-----CSSGGGSSCBC---
T ss_pred EEEEEEECCCCCEEEECHHHHCCCCCCCCHHHHHHHHHHHH---CCCCCCCCCCCCCCCCC-----CCCCCCCCCCC---
T ss_conf 46999978999676058889668779963699999999998---49978854341699866-----17898899707---
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEECCCC-CCCCCCCCCHHHHHHHHHHHCCCCEEEE
Q ss_conf 457889987777765455420100578999888768872661222002454-3333445301345555542013620467
Q gi|254780698|r 131 GILALITRSANDVSTAFGEFISGSEKKFAILMSNKAKKIGMQNTIYKNASG-LHDKNQITTARDQAILGILLRKNFPQYY 209 (336)
Q Consensus 131 Ll~~lli~S~NdAa~alAe~i~Gs~~~Fv~~MN~~A~~lGl~~t~f~np~G-l~~~~~~tta~Dla~l~~~~~~~~p~~~ 209 (336)
+.-.+..|.|...+-|++.++- +.+.+.++++|+.+....++.. +....-..|+.+|+.+...+...-..+.
T Consensus 93 -l~~Al~~S~N~~~~~la~~lG~------~~~~~~~~~~G~g~~~~~~~~~~~~~g~~~iTPlqma~~~~~ian~g~~~~ 165 (246)
T 2iwb_A 93 -LNSSMKYSVNWYYENLNKHLRQ------DEVKSYLDLIEYGNEEISGNENYWNESSLKISAIEQVNLLKNMKQHNMHFD 165 (246)
T ss_dssp -HHHHHHTTCHHHHHHHHTTSCH------HHHHHHHHHHTCTTCCCCSCSSTTSSSSCCBCHHHHHHHHHHHHTTCSSSC
T ss_pred -HHHHHHCCCHHHHHHHHHHCCC------CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
T ss_conf -7884224562999999987286------078999998289999889876422268752569999999999983896788
Q ss_pred E-EEEEEEEEECCEEEEEECHHCCCCCCCEEEEECCCCCCCC--EEEEEEEECCEEEEEEEE
Q ss_conf 7-6115654347869972101025768700565224233371--799999978979999981
Q gi|254780698|r 210 K-YFSIRKFRYRNRIITNHNKLLNKMHNIDGIKTGYTRNSGF--NIVTSLRYKDDPIVAVVM 268 (336)
Q Consensus 210 ~-~~s~~~~~~~~~~~~n~N~lL~~~~g~~G~KTG~T~~AG~--clv~~a~~~g~~lI~Vvl 268 (336)
. .... ..+....... ..+....+.|||.+..... -||+.+..++.+++.+|+
T Consensus 166 p~~~~~---~~~~~~~~~~----~~~~~~~ktgTg~~~~~~~~aWFvGf~p~~~p~~~~~v~ 220 (246)
T 2iwb_A 166 NKAIEK---VENSMTLKQK----DTYKYVGKTGTGIVNHKEANGWFVGYVETKDNTYYFATH 220 (246)
T ss_dssp HHHHHH---HHHHTEEEEC----SSEEEEEEEEEEEETTEEEEEEEEEEEEESSCEEEEEEE
T ss_pred CHHHHH---HHHHHHHHHH----HHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEE
T ss_conf 325567---7777777654----234432110104468988788999999889995999999