HHsearch results for GI: 254780698 and protein with PDBid: 2qmi_A
>2qmi_A PBP related beta-lactamase; PAB87, octamer, LU-HPDO3A, archaea, hydrolase; HET: DO3; 2.20A {Pyrococcus abyssi}
Probab=98.32 E-value=8.2e-07 Score=58.24 Aligned_cols=143 Identities=15% Similarity=0.130 Sum_probs=80.5
Q ss_pred CCCCCEEEEECCCCEEEEECC-------------CCCCCC-CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCC
Q ss_conf 876319999988962831136-------------998888-138799999999997555898855411153676124544
Q gi|254780698|r 51 KPKYSSIVIDVNKNQMTGFKQ-------------DEPRYP-ASLTKMMTLYIIFEYLQSKKLHLNTQIPVSKTAATQNPS 116 (336)
Q Consensus 51 ~~~~sAiv~D~~tG~ILy~Kn-------------~~~~~P-ASlTKlMTa~v~le~i~~g~i~~~~~v~is~~a~~~~~s 116 (336)
.|..|..| ...|+++|++. ++-.++ ||+||.+|+++++..+++|++++|++|.- +--..
T Consensus 19 vPG~sv~V--~~~g~~v~~~~~G~ad~~~~~p~~~dT~f~i~SvSK~fTa~~i~~Lve~G~l~lddpv~~--ylP~~--- 91 (447)
T 2qmi_A 19 VPGISISI--IKDGDVVYAKGFGYRNVEARLPSTPETIYGIGSITKSFTALAIMKLVEEGGLSLDDPVEK--FVNIK--- 91 (447)
T ss_dssp CCEEEEEE--EETTEEEEEEEEEEEETTTTEECCSSCBEECGGGHHHHHHHHHHHHHHTTSCCTTSBGGG--TSSSC---
T ss_pred CCEEEEEE--EECCEEEEEEEEEEECCCCCCCCCCCCEEECEEHHHHHHHHHHHHHHHCCCCCCCCCHHH--HCCCC---
T ss_conf 98799999--999999999857750467799899999796700899999999999998699998780889--68522---
Q ss_pred CCCCCCCCEEEEEHHHHH---H-----------------------------HHH---------------H-HHHHHHHH-
Q ss_conf 322578856883024578---8-----------------------------998---------------7-77776545-
Q gi|254780698|r 117 KLYLKEKTYFTTEQGILA---L-----------------------------ITR---------------S-ANDVSTAF- 147 (336)
Q Consensus 117 ~~~l~~g~~~tv~dLl~~---l-----------------------------li~---------------S-~NdAa~al- 147 (336)
....++.+|+++||.- + ... + .|..-..|
T Consensus 92 --~~~~~~~iTi~~LLtHtSGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PGt~~~Ysn~~y~lLg 169 (447)
T 2qmi_A 92 --LRPFGEPVTVHHLLTHSSGIPSLGYAEAFIDGMVGGDNWLPVSTPEETIAFARDMEKWAVAKPGERFFYLNTGYVLLG 169 (447)
T ss_dssp --CCGGGCCCBHHHHHTTCSSCCBCSHHHHHHHHHTTCSCCCCCCSHHHHHHHGGGGGGGCCSCTTSCCCCCHHHHHHHH
T ss_pred --CCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHH
T ss_conf --378889858999701767998766521223101022223555672678999997542235688861123455799999
Q ss_pred --HHHHCCHHHHHHHHHHH-HHHHHCCCCCCEECCCCC---------------------------CCCCCCCCHHHHHHH
Q ss_conf --54201005789998887-688726612220024543---------------------------333445301345555
Q gi|254780698|r 148 --GEFISGSEKKFAILMSN-KAKKIGMQNTIYKNASGL---------------------------HDKNQITTARDQAIL 197 (336)
Q Consensus 148 --Ae~i~Gs~~~Fv~~MN~-~A~~lGl~~t~f~np~Gl---------------------------~~~~~~tta~Dla~l 197 (336)
.|.+.| ..|.+.+.+ -.+-|||++|.|..+... ...+-++|+.||++.
T Consensus 170 ~iie~vtg--~~~~~~~~~~I~~PLgm~~T~~~~~~~~~~~~~a~gy~~~~~~~~~~~~~~~~~~~aggl~st~~Dla~~ 247 (447)
T 2qmi_A 170 KIIEKVSG--VSYEEYIKKKILEPLGMNRSYFFKEEVEKDKDVAMGYILDKEGRLVPQPFPYGITADGGLLSSVLDLAKY 247 (447)
T ss_dssp HHHHHHHS--SCHHHHHHHHTTTTTTCTTCBSSHHHHTTCSCBCCEEEECTTSCEEEECCCTTCCTTTCCEECHHHHHHH
T ss_pred HHHHHHHC--CCHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 99999849--9999999997651128866354687344045410002117656536667766666554200789999999
Q ss_pred HHHHCCC
Q ss_conf 5420136
Q gi|254780698|r 198 GILLRKN 204 (336)
Q Consensus 198 ~~~~~~~ 204 (336)
.+.++.+
T Consensus 248 ~~~~l~~ 254 (447)
T 2qmi_A 248 LKMYIER 254 (447)
T ss_dssp HHHHHTT
T ss_pred HHHHHHC
T ss_conf 9999748