PSIBLAST alignment of GI: 254780698 and protein with PDB id: 1tvf
>gi|50513810|pdb|1TVF|A Chain A, Crystal Structure Of Penicillin-Binding Protein 4 (Pbp4) From Staphylococcus Aureus Length = 369
>gi|50513811|pdb|1TVF|B Chain B, Crystal Structure Of Penicillin-Binding Protein 4 (Pbp4) From Staphylococcus Aureus Length = 369
Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 50/305 (16%), Positives = 103/305 (33%), Gaps = 31/305 (10%)
Query: 62 NKNQMTGFKQ-DEPRYPASLTKMMTLYIIFEYLQSKKLHLNTQIPVSKTAATQNP----S 116
Q+ D PAS+TK+MT+Y+ E + +L L+ + ++ + S
Sbjct: 43 QTGQLLYQYNIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVTMTNKEYIMSTLPELS 102
Query: 117 KLYLKEKTYFTTEQGILALITRSANDVSTAFGEFISGSEKKFAILMSNKAKKIGMQNTIY 176
L +T + ++ S+N + + +S + F LM+NKAK IGM+NT +
Sbjct: 103 NTKLYPGQVWTIADLLQITVSNSSNAAALILAKKVSKNTSDFVDLMNNKAKAIGMKNTHF 162
Query: 177 KNASGLHDKNQITTARDQAILGILLRKNFPQY-----YKYFSIRKFRYRNRIITNHNKLL 231
N +G + + A + Y + K + + +
Sbjct: 163 VNPTGAENSRLRSFAPTKYKDQERTVTTARDYAILDLHVIKETPKILDFTKQLAPTTHAV 222
Query: 232 NKM-------------HNIDGIKTGYTRNSGFNIVTSLRYKDDPIVAVVMGMPT------ 272
DG+KTG + + +N + + I V+MG
Sbjct: 223 TYYTFNFSLEGAKMSLPGTDGLKTGSSDTANYNHTITTKRGKFRINQVIMGAGDYKNLGG 282
Query: 273 SQERDQKALELITSFLEKKTLKHQQTHRKDNL--SSTSLKKSLMIKKLKRTYSQFKKIDA 330
++R+ L+ ++ + + + ++ L + K+
Sbjct: 283 EKQRNMMGNALMERSFDQYKYVKILSKGEQRINGKKYYVENDLYDVLPSDFSKKDYKLVV 342
Query: 331 KAHST 335
+
Sbjct: 343 EDGKV 347