RPSBLAST alignment of GI: 254780698 and protein with PDBid: 1m40
>1m40_A TEM-1, beta-lactamase TEM; acylation mechanism, ultra- high resolution, hydrolase; HET: CB4; 0.85A {Escherichia coli} SCOP: e.3.1.1 PDB: 1jwp_A* 1nxy_A* 1ny0_A* 1nym_A* 1nyy_A* 1pzo_A* 1erm_A* 1ero_A* 1erq_A* 1s0w_A 1xpb_A 1li0_A 1htz_A 1jtd_A 1esu_A 1jwz_A* 1li9_A 1jwv_A* 1jtg_A 1axb_A* ... Length = 263
Score = 148 bits (373), Expect = 2e-36
Identities = 36/235 (15%), Positives = 73/235 (31%), Gaps = 3/235 (1%)
Query: 53 KYSSIVIDVNKNQ-MTGFKQDEPRYPASLTKMMTLYIIFEYLQSKKLHLNTQIPVSKTAA 111
+ I +D+N + + F+ +E S K++ + + + + L +I S+
Sbjct: 18 RVGYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDL 77
Query: 112 TQNPSKLYLKEKTYFTTEQGILALITRSANDVSTAFGEFISGSEK--KFAILMSNKAKKI 169
+ T + A IT S N + I G ++ F M + ++
Sbjct: 78 VEYSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRL 137
Query: 170 GMQNTIYKNASGLHDKNQITTARDQAILGILLRKNFPQYYKYFSIRKFRYRNRIITNHNK 229
A +++ T A L LL + + +++ +
Sbjct: 138 DRWEPELNEAIPNDERDTTTPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLR 197
Query: 230 LLNKMHNIDGIKTGYTRNSGFNIVTSLRYKDDPIVAVVMGMPTSQERDQKALELI 284
K+G I+ +L P VV+ SQ + I
Sbjct: 198 SALPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQI 252