RPSBLAST alignment of GI: 254780698 and protein with PDBid: 3a3j
>3a3j_A PBP5; penicillin binding protein 5, DACA, hydrolase; 2.15A {Haemophilus influenzae} Length = 344
Score = 168 bits (427), Expect = 1e-42
Identities = 78/244 (31%), Positives = 137/244 (56%), Gaps = 9/244 (3%)
Query: 47 ELHAKPKYSSIVIDVNKNQ-MTGFKQDEPRYPASLTKMMTLYIIFEYLQSKKLHLNTQIP 105
++ A+ + +++D N +T D+ +YPASLTKMMT Y++ L+ K+H +
Sbjct: 6 QITAQ---TYVLMDYNSGAILTALNPDQRQYPASLTKMMTSYVVGVALKQGKIHNTDMVT 62
Query: 106 VSKTAATQN---PSKLYLKEKTYFTTEQGILALITRSANDVSTAFGEFISGSEKKFAILM 162
+ ++A +N SK++L T + +I S ND + A E ISG+ F M
Sbjct: 63 IGESAWGRNFPDSSKMFLDLNTQVSVADLNRGVIVVSGNDATVALAEHISGNVPNFVETM 122
Query: 163 SNKAKKIGMQNTIYKNASGLHDKNQITTARDQAILGILLRKNFPQYYKYFSIRKFRYRNR 222
+ ++ G++NT + GL D NQ ++ARD AI+G + ++ P+ YK +S + F +
Sbjct: 123 NKYVQQFGLKNTNFTTPHGLDDPNQYSSARDMAIIGAHIIRDLPEEYKIYSEKDFTFNKI 182
Query: 223 IITNHNK-LLNKMHNIDGIKTGYTRNSGFNIVTSLRYKD-DPIVAVVMGMPTSQERDQKA 280
N N L +K N+DG+KTG+T +G+N+V S + +++VVMG+PT + R+ ++
Sbjct: 183 KQPNRNGLLWDKTINVDGMKTGHTSQAGYNLVASATTSNNMRLISVVMGVPTYKGREVES 242
Query: 281 LELI 284
+L+
Sbjct: 243 KKLL 246