HHsearch alignment for GI: 254780700 and conserved domain: COG3480
>COG3480 SdrC Predicted secreted protein containing a PDZ domain [Signal transduction mechanisms].
Probab=98.22 E-value=2.5e-07 Score=65.36 Aligned_cols=71 Identities=23% Similarity=0.425 Sum_probs=65.1
Q ss_pred CCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCEEEEECC-CCCEEEECCCCCCC
Q ss_conf 4113201111121134671167888752431478743101222035667520101204-78166512556558
Q gi|254780700|r 306 KGSLITAVVKESPADKAGMKVGDVICMLDGRIIKSHQDFVWQIASRSPKEQVKISLCK-EGSKHSVAVVLGSS 377 (489)
Q Consensus 306 ~GvlV~~V~~~sPA~~AGLk~GDvI~~ing~~I~~~~~l~~~i~~~~~G~~v~l~v~R-~g~~~~~~V~l~~~ 377 (489)
T Consensus 130 ~gvyv~~v~~~~~~~g-kl~~gD~i~avdg~~f~s~~e~i~~v~~~k~Gd~VtI~~~r~~~~~~~~~~tl~~~ 201 (342)
T COG3480 130 AGVYVLSVIDNSPFKG-KLEAGDTIIAVDGEPFTSSDELIDYVSSKKPGDEVTIDYERHNETPEIVTITLIKN 201 (342)
T ss_pred EEEEEEECCCCCCHHC-EECCCCEEEEECCEECCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEEEEEE
T ss_conf 3279997147863102-23268768855894457889999998546889769999995169872689999960