HHsearch alignment for GI: 254780700 and conserved domain: COG3975

>COG3975 Predicted protease with the C-terminal PDZ domain [General function prediction only].

Probab=98.56  E-value=2.8e-08  Score=71.45  Aligned_cols=65  Identities=31%  Similarity=0.454  Sum_probs=40.3

Q ss_pred             CEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCEEEECCCCCCCCC
Q ss_conf             1132011111211346711678887524314787431012220356675201012047816651255655876
Q gi|254780700|r  307 GSLITAVVKESPADKAGMKVGDVICMLDGRIIKSHQDFVWQIASRSPKEQVKISLCKEGSKHSVAVVLGSSPT  379 (489)
Q Consensus       307 GvlV~~V~~~sPA~~AGLk~GDvI~~ing~~I~~~~~l~~~i~~~~~G~~v~l~v~R~g~~~~~~V~l~~~p~  379 (489)
T Consensus       463 ~~~i~~V~~~gPA~~AGl~~Gd~ivai~G~--------s~~l~~~~~~d~i~v~~~~~~~L~e~~v~~~~~~~  527 (558)
T COG3975         463 HEKITFVFPGGPAYKAGLSPGDKIVAINGI--------SDQLDRYKVNDKIQVHVFREGRLREFLVKLGGDPT  527 (558)
T ss_pred             EEEEEECCCCCHHHHCCCCCCCEEEEECCC--------CCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCC
T ss_conf             069984478981675158875679997673--------55522144266248998257823885213688766