HHsearch alignment for GI: 254780700 and conserved domain: PRK10898
>PRK10898 serine endoprotease; Provisional.
Probab=99.02 E-value=4.6e-09 Score=76.42 Aligned_cols=87 Identities=16% Similarity=0.181 Sum_probs=66.3
Q ss_pred CCCCEEEEECCHHHCC------EEEEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 5254698728965715------2007999606889789829998889998899993899999999998862599569999
Q gi|254780700|r 392 ELLGMVLQDINDGNKK------LVRIVALNPNREREVEAKGIQKGMTIVSVNTHEVSCIKDVERLIGKAKEKKRDSVLLQ 465 (489)
Q Consensus 392 ~~lGl~v~~l~~~~~~------~~gi~vv~v~~~s~Aa~~GL~~GDiIl~VNg~~V~s~~dl~~iL~~~k~~~~~~VLL~ 465 (489)
T Consensus 257 g~LGi~~~~~~~~~~~~~~~~~~~Gv~V~~V~~~sPA~~AGL~~GDvI~~idg~~v~~~~~l~~~l~~~~pG--d~v~l~ 334 (355)
T PRK10898 257 GYIGIGGREIAPLHAQGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVNNKPAISALETMDQVAEIRPG--SVIPVV 334 (355)
T ss_pred CEEEEEEEECCHHHHHHCCCCCCCCCEEEEECCCCHHHHCCCCCCCEEEEECCEECCCHHHHHHHHHHCCCC--CEEEEE
T ss_conf 242477443798899654898777528988799995898599989999998998938999999999718997--989999
Q ss_pred EEECCCCCCCCCCCEEEEEEECC
Q ss_conf 97177643346884368887528
Q gi|254780700|r 466 IKYDPDMQSGNDNMSRFVSLKID 488 (489)
Q Consensus 466 V~r~~~~~~~~~~~~rFVal~ld 488 (489)
T Consensus 335 v~R~G~~--------~~~~VtL~ 349 (355)
T PRK10898 335 VMRDDKQ--------LTLQVTIQ 349 (355)
T ss_pred EEECCEE--------EEEEEEEC
T ss_conf 9999999--------99999978