HHsearch alignment for GI: 254780700 and conserved domain: PRK10942
>PRK10942 serine endoprotease; Provisional.
Probab=99.04 E-value=2.2e-09 Score=78.48 Aligned_cols=81 Identities=17% Similarity=0.191 Sum_probs=65.4
Q ss_pred CCCCCEEEEECCHHHCC------EEEEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 45254698728965715------200799960688978982999888999889999389999999999886259956999
Q gi|254780700|r 391 KELLGMVLQDINDGNKK------LVRIVALNPNREREVEAKGIQKGMTIVSVNTHEVSCIKDVERLIGKAKEKKRDSVLL 464 (489)
Q Consensus 391 ~~~lGl~v~~l~~~~~~------~~gi~vv~v~~~s~Aa~~GL~~GDiIl~VNg~~V~s~~dl~~iL~~~k~~~~~~VLL 464 (489)
T Consensus 288 rg~lGv~~~~v~~~la~~lgl~~~~GalV~~V~~~sPA~kAGL~~GDVI~~vdG~~I~~~~dL~~~v~~~~pG--~~V~l 365 (474)
T PRK10942 288 RGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVG--SKMTL 365 (474)
T ss_pred CEEEEEEEEECCHHHHHHCCCCCCCCCEEEECCCCCCHHHCCCCCCCEEEEECCEECCCHHHHHHHHHCCCCC--CEEEE
T ss_conf 1033159885372567761777677726520177993677699989999998998968999999999618988--88999
Q ss_pred EEEECCCCC
Q ss_conf 997177643
Q gi|254780700|r 465 QIKYDPDMQ 473 (489)
Q Consensus 465 ~V~r~~~~~ 473 (489)
T Consensus 366 ~v~R~Gk~~ 374 (474)
T PRK10942 366 GLLRDGKPV 374 (474)
T ss_pred EEEECCEEE
T ss_conf 999999899