HHsearch alignment for GI: 254780700 and conserved domain: cd00992

>cd00992 PDZ_signaling PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. In this subfamily of PDZ domains an N-terminal beta-strand forms the peptide-binding groove base, a circular permutation with respect to PDZ domains found in proteases.
Probab=98.09  E-value=4.4e-07  Score=63.80  Aligned_cols=68  Identities=24%  Similarity=0.254  Sum_probs=41.5

Q ss_pred             CCCCEEEEECCHHHCCEEEEEEEEECCCCHHHHCCCCCCCEEEEECCEECC--CHHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf             525469872896571520079996068897898299988899988999938--999999999988625995699999
Q gi|254780700|r  392 ELLGMVLQDINDGNKKLVRIVALNPNREREVEAKGIQKGMTIVSVNTHEVS--CIKDVERLIGKAKEKKRDSVLLQI  466 (489)
Q Consensus       392 ~~lGl~v~~l~~~~~~~~gi~vv~v~~~s~Aa~~GL~~GDiIl~VNg~~V~--s~~dl~~iL~~~k~~~~~~VLL~V  466 (489)
T Consensus        12 ~~lG~~l~~~~~~---~~~~~I~~v~~~s~A~~~~L~~GD~Il~INg~~v~~~~~~~v~~~l~~~---~-~~v~L~V   81 (82)
T cd00992          12 GGLGFSLRGGKDS---GGGIFVSRVEPGGPAERGGLRVGDRILEVNGVSVEGLTHEEAVELLKNS---G-DEVTLTV   81 (82)
T ss_pred             CCCCEEEECCCCC---CCCEEEEEECCCCCHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHCC---C-CEEEEEE
T ss_conf             9617899622579---9999999986899034348999999898999999999899999999849---9-9599998