BLAST/PSIBLAST alignment of GI: 254780700 and GI: 49475272 at iteration 1

>gi|49475272|ref|YP_033313.1| Serine protease [Bartonella henselae str. Houston-1] Length = 503
>gi|51704299|sp|P54925|DEGP_BARHE RecName: Full=Probable periplasmic serine protease DO-like; AltName: Full=Antigen htrA; Flags: Precursor Length = 503
>gi|49238078|emb|CAF27285.1| Serine protease [Bartonella henselae str. Houston-1] Length = 503

 Score =  301 bits (771), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 185/472 (39%), Positives = 273/472 (57%), Gaps = 49/472 (10%)

Query: 43  VIARVSPSIVSVMVEPKKKVS---VEQMFNAYGFGNLPEDHPLKNYFRKDFHKFFSGEEP 99
           ++++V P++VSV V+  KK         F+  GF  LP+ HPLK +F+     F++ ++P
Sbjct: 55  IVSQVKPAVVSVQVKSNKKKKEWFFSDFFSTPGFDQLPDQHPLKKFFQD----FYNRDKP 110

Query: 100 I-----LSDTVERLMFGSGFFITDDGYILTSNHIVEDGASFSVILSDDTELPAKLVGTDA 154
                  S  +  + FGSGFFI+ DGYI+T+NH++ DG S++V+L D TEL AKL+GTD 
Sbjct: 111 SNKSLQRSHRLRPIAFGSGFFISSDGYIVTNNHVISDGTSYAVVLDDGTELNAKLIGTDP 170

Query: 155 LFDLAVLKVQSDRKFIPVEFEDANNIRVGEAVFTIGNPFRLRGTVSAGIVSALDRDIPDR 214
             DLAVLKV   RKF  V+F D + +RVG+ V  IGNPF L GTV+AGIVSA  RDI   
Sbjct: 171 RTDLAVLKVNEKRKFSYVDFGDDSKLRVGDWVVAIGNPFGLGGTVTAGIVSARGRDI--- 227

Query: 215 PGT-----FTQIDAPINQGNSGGPCFNALGHVIGVNAMIVTSGQFHMGVGLIIPLSIIKK 269
            GT     F QIDA +N+GNSGGP F+  G V+GVN  I +    ++G+   IP +  K+
Sbjct: 228 -GTGVYDDFIQIDAAVNRGNSGGPTFDLNGKVVGVNTAIFSPSGGNVGIAFAIPAATAKQ 286

Query: 270 AIPSLISKGRVDHGWFGIMTQNLTQELAIPLGLRGTKGSLITAVVKESPADKAGMKVGDV 329
            +  LI KG V  GW G+  Q +T+E++  +GL+  KG+LIT  +K  PA KAG+K GDV
Sbjct: 287 VVQQLIEKGLVQRGWLGVQIQPVTKEISDSIGLKEAKGALITDPLK-GPAAKAGIKAGDV 345

Query: 330 ICMLDGRIIKSHQDFVWQIASRSPKEQVKISLCKEGSKHSVAVVLGSSPTAKNDMHLEVG 389
           I  ++G  I   +D   +IA+ SP E V + + K G + ++ V L S P    D +++ G
Sbjct: 346 IISVNGEKINDVRDLAKRIANMSPGETVTLGVWKSGKEENIKVKLDSMP---EDENMKDG 402

Query: 390 DK------------ELLGMVLQDINDGNKKLVRIVALNPNREREVEAKGIQKGMTIVSVN 437
            K            E  G+++   +DG    V +V  + + + +   KGI+ G  IV+VN
Sbjct: 403 SKYSNEHGNSDETLEDYGLIVAPSDDG----VGLVVTDVDPDSDAADKGIRPGDVIVTVN 458

Query: 438 THEVSCIKDVERLIGKAKEKKRDSVLLQIKYDPDMQSGNDNMSRFVSLKIDK 489
              V  + D+   I  A++  R ++LLQ++         ++ +RFV+L I K
Sbjct: 459 NKSVKKVSDITDTIKNAQKLGRKAILLQVR--------TNDQNRFVALPIFK 502