PSIBLAST alignment of GI: 254780700 and protein with PDB id: 1lcy

>gi|21466051|pdb|1LCY|A Chain A, Crystal Structure Of The Mitochondrial Serine Protease Htra2 Length = 325
 Score = 64.4 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 9/79 (11%), Positives = 30/79 (37%), Gaps = 6/79 (7%)

Query: 396 MVLQDINDGNKKLVRIVALNPNREREVEAKGIQKGMTIVSVNTHEVSCIKDVERLIGKAK 455
           + L++ +  + +   ++             G++ G  I+++    V   +DV   +    
Sbjct: 244 LQLREPSFPDVQ-HGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAEDVYEAVRT-- 300

Query: 456 EKKRDSVLLQIKYDPDMQS 474
              +  + +QI+   +  +
Sbjct: 301 ---QSQLAVQIRRGRETLT 316