PSIBLAST alignment of GI: 254780700 and protein with PDB id: 1soz

>gi|49259100|pdb|1SOZ|A Chain A, Crystal Structure Of Degs Protease In Complex With An Activating Peptide Length = 314
>gi|49259101|pdb|1SOZ|B Chain B, Crystal Structure Of Degs Protease In Complex With An Activating Peptide Length = 314
 Score = 55.9 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/113 (13%), Positives = 34/113 (30%), Gaps = 5/113 (4%)

Query: 365 GSKHSVAVVLGSSPTAKNDMHLEVGDKELLGMVLQDIND---GNKKLVRIVALNPNRERE 421
           G      +          D  +  G   + G  +  ++    G  +L  IV    + +  
Sbjct: 192 GFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREIAPLHAQGGGIDQLQGIVVNEVSPDGP 251

Query: 422 VEAKGIQKGMTIVSVNTHEVSCIKDVERLIGKAKEKKRDSVLLQIKYDPDMQS 474
               GIQ    I+SV+        +    + + +      + + +  D    +
Sbjct: 252 AANAGIQVNDLIISVDNKPAISALETMDQVAEIRPG--SVIPVVVMRDDKQLT 302