PSIBLAST alignment of GI: 254780700 and protein with PDB id: 2qgr
>gi|162330037|pdb|2QGR|A Chain A, Structure Of The R178a Mutant Of Delta Pdz Degs Protease Length = 243
Score = 59.0 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 65/225 (28%), Positives = 93/225 (41%), Gaps = 42/225 (18%)
Query: 23 SSTYLVLEAKLPPSSVDLPPVIARVSPSIVSVMVEPKKKVSVEQMFNAYGFGNLPEDHPL 82
ST P+S +L + R +P++V+V S Q+
Sbjct: 19 LSTPQFDSTDETPASYNLA--VRRAAPAVVNVYNRGLNTNSHNQL--------------- 61
Query: 83 KNYFRKDFHKFFSGEEPILSDTVERLMFGSGFFITDDGYILTSNHIVEDGASFSVILSDD 142
E GSG + GYI+T+ H++ D V L D
Sbjct: 62 -----------------------EIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQDG 98
Query: 143 TELPAKLVGTDALFDLAVLKVQSDRKFIPVEFEDANNIRVGEAVFTIGNPFRLRGTVSAG 202
A LVG+D+L DLAVLK+ + + +G+ V IGNP+ L T++ G
Sbjct: 99 RVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQG 158
Query: 203 IVSALDRDI--PDRPGTFTQIDAPINQGNSGGPCFNALGHVIGVN 245
I+SA P F Q DA IN GNSGG N+LG ++G+N
Sbjct: 159 IISATGAIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGIN 203