RPSBLAST alignment for GI: 254780700 and conserved domain: cd00990

>gnl|CDD|29047 cd00990, PDZ_glycyl_aminopeptidase, PDZ domain associated with archaeal and bacterial M61 glycyl-aminopeptidases. May be responsible for substrate recognition and/or binding, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. In this subfamily of protease-associated PDZ domains a C-terminal beta-strand is presumed to form the peptide-binding groove base, a circular permutation with respect to PDZ domains found in Eumetazoan signaling proteins.. Length = 80
 Score = 38.4 bits (89), Expect = 0.004
 Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 3/67 (4%)

Query: 310 ITAVVKESPADKAGMKVGDVICMLDGRIIKSHQDFVWQIASRSPKEQVKISLCKEGSKHS 369
           +T V  +SPADKAG+  GD +  ++G  + + QD   ++      + V++++ ++     
Sbjct: 16  VTFVRDDSPADKAGLVAGDELVAVNGWRVDALQD---RLKEYQAGDPVELTVFRDDRLIE 72

Query: 370 VAVVLGS 376
           V + L  
Sbjct: 73  VPLTLAD 79