HHsearch alignment for GI: 254780701 and conserved domain: COG4585
>COG4585 Signal transduction histidine kinase [Signal transduction mechanisms].
Probab=99.71 E-value=6.9e-11 Score=112.25 Aligned_cols=153 Identities=20% Similarity=0.271 Sum_probs=105.0
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHC-CCCHHHHHHHHHHHHH
Q ss_conf 999999999999987422001565310119999999999999999731122100036761010-4798999988777655
Q gi|254780701|r 299 QHLLNLINEILDLSRIEAGRYELSESAISLIDIVRECIIMLQLRAQEKNIEIFQKIDPSLSSV-WADEKGMRQVILNLLS 377 (495)
Q Consensus 299 ~~L~~Li~~lLdlsrleag~~~l~~~~v~L~~li~~~~~~~~~~A~~~~~~l~~~~~~~~~~v-~~D~~~L~qvl~NLi~ 377 (495)
T Consensus 212 ~~i~~~~~e~l~evR~~v--~~Lrp~~l~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~l~rivQEalt 289 (365)
T COG4585 212 KEIEKLLREALQEVRALV--RDLRPVELEGLGLVEALRALLADFEERTGITVDLSLGSELERLPPEAEDALFRIVQEALT 289 (365)
T ss_pred HHHHHHHHHHHHHHHHHH--HHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999--971973221211799999999998775083788615764467996899999999999998
Q ss_pred HHHHCCCCCCEEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEE
Q ss_conf 68860679887999999976985999998789978987854422652315777678999888058999999996198599
Q gi|254780701|r 378 NAVKFTAIGGRVHVTVGWTSGRGQYISIKDNGPGIAEGEIPTVLTSFGQGSIAIKSAEQGVGLGLPIAQSIMANHGGQFL 457 (495)
Q Consensus 378 NAiK~T~~gG~V~v~~~~~~~~~~~i~V~DtG~GI~~e~~~~iF~~F~r~~~~~~~~~~GtGLGLaIvk~lve~hgG~i~ 457 (495)
T Consensus 290 N~~rHa~A-~~v~V~l~~-~~~~l~l~V~DnG~Gf~~~~~~-------------------~~~GL~~mreRv~~lgG~l~ 348 (365)
T COG4585 290 NAIRHAQA-TEVRVTLER-TDDELRLEVIDNGVGFDPDKEG-------------------GGFGLLGMRERVEALGGTLT 348 (365)
T ss_pred HHHHCCCC-CEEEEEEEE-CCCEEEEEEEECCCCCCCCCCC-------------------CCCCHHHHHHHHHHCCCEEE
T ss_conf 99875784-569999998-2988999999899788976457-------------------77667669999998699899
Q ss_pred EEEECCCCEEEEEEECH
Q ss_conf 99798995298898472
Q gi|254780701|r 458 IRSKLREGVEVIAILPN 474 (495)
Q Consensus 458 v~S~~G~Gt~f~v~LP~ 474 (495)
T Consensus 349 i~S~~g~Gt~i~i~lPl 365 (365)
T COG4585 349 IDSAPGQGTTVTITLPL 365 (365)
T ss_pred EEECCCCCEEEEEEEEC
T ss_conf 98559997799999509