HHsearch alignment for GI: 254780701 and conserved domain: PRK04069

Probab=98.29  E-value=2.1e-05  Score=65.16  Aligned_cols=98  Identities=16%  Similarity=0.206  Sum_probs=71.9

Q ss_pred             HHHHHHHHHHHHHHHCC---CCCCEEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf             99988777655688606---798879999999769859999987899789878544226523157776789998880589
Q gi|254780701|r  367 GMRQVILNLLSNAVKFT---AIGGRVHVTVGWTSGRGQYISIKDNGPGIAEGEIPTVLTSFGQGSIAIKSAEQGVGLGLP  443 (495)
Q Consensus       367 ~L~qvl~NLi~NAiK~T---~~gG~V~v~~~~~~~~~~~i~V~DtG~GI~~e~~~~iF~~F~r~~~~~~~~~~GtGLGLa  443 (495)
T Consensus        42 di~LAV~EA~tNaI~Hay~~~~~~~i~i~~~~~-~~~l~i~V~D~G~gfD~~~~~~~~~P~~~~~~l~--~~~~gGlGl~  118 (158)
T PRK04069         42 DLKIAVSEACTNAVQHAYKEEEVGEINIRFEIY-EDRLEIVVADNGDSFDYETTKSKIGPYDPSEPID--DLREGGLGLF  118 (158)
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEE-CCEEEEEEEECCCCCCHHHCCCCCCCCCCCCCHH--HCCCCCCHHH
T ss_conf             899999999999999751569994799999995-9999999999174879567432458888888611--1367874099


Q ss_pred             HHHHHHHHCCCEEEEEEECCCCEEEEEEEC
Q ss_conf             999999961985999979899529889847
Q gi|254780701|r  444 IAQSIMANHGGQFLIRSKLREGVEVIAILP  473 (495)
Q Consensus       444 Ivk~lve~hgG~i~v~S~~G~Gt~f~v~LP  473 (495)
T Consensus       119 lI~~lmD----eV~~~~--~~Gt~v~m~K~  142 (158)
T PRK04069        119 LIETLMD----DVTVYK--DSGVTVSMTKY  142 (158)
T ss_pred             HHHHHCC----EEEEEE--CCCEEEEEEEE
T ss_conf             9997525----589990--89829999999