HHsearch alignment for GI: 254780701 and conserved domain: PRK05559

Probab=93.51  E-value=0.017  Score=40.41  Aligned_cols=79  Identities=19%  Similarity=0.264  Sum_probs=36.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCEEEEEEEECCCC-----CCHHHHHHHCCCCCCCCCCCC---CC
Q ss_conf             7989999887776556886067988799999997698599999878997-----898785442265231577767---89
Q gi|254780701|r  363 ADEKGMRQVILNLLSNAVKFTAIGGRVHVTVGWTSGRGQYISIKDNGPG-----IAEGEIPTVLTSFGQGSIAIK---SA  434 (495)
Q Consensus       363 ~D~~~L~qvl~NLi~NAiK~T~~gG~V~v~~~~~~~~~~~i~V~DtG~G-----I~~e~~~~iF~~F~r~~~~~~---~~  434 (495)
T Consensus       498 ~DGsHI~~Llltff~~~~p~Li~~G~vy~~~t----Pl--~kv~-~gk~~~~y~~~e~e~~~~~~~~~~~~~~~k~~i~r  570 (633)
T PRK05559        498 VDGAHIATLLLTFFYRHFPPLVEAGHVYIALP----PL--YRVD-VGKGKTFYALDEEEKEELLKKLGKGGKKGKVEIQR  570 (633)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHCCCEEEECC----CE--EEEE-ECCCCEEEECCHHHHHHHHHHHHHCCCCCCCEEEE
T ss_conf             97688999999999987699886595899739----88--9999-38943698588999999999864115778703687


Q ss_pred             CCCCCCHHHHHHHHHH
Q ss_conf             9988805899999999
Q gi|254780701|r  435 EQGVGLGLPIAQSIMA  450 (495)
Q Consensus       435 ~~GtGLGLaIvk~lve  450 (495)
T Consensus       571 yK--GLGem~~~ql~e  584 (633)
T PRK05559        571 FK--GLGEMNPDQLWE  584 (633)
T ss_pred             EE--ECCCCCHHHHHH
T ss_conf             64--067799899998