HHsearch alignment for GI: 254780701 and conserved domain: PRK09303
>PRK09303 adaptive-response sensory kinase; Validated.
Probab=100.00 E-value=0 Score=486.13 Aligned_cols=242 Identities=30% Similarity=0.430 Sum_probs=216.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH----HHHHHHHHHHHHHHHH
Q ss_conf 999999999999999998899999776420138999999999850336878937899999----9999999999999999
Q gi|254780701|r 232 KSLSDETRKRAEEENLAKSRFLASMSHELRTPLNAILGFSEVIELETMGPLNNETYKEYI----GDIHRSGQHLLNLINE 307 (495)
Q Consensus 232 ~~~~~~a~~~ae~a~~~Ks~FlA~~SHELRTPL~aI~g~~elL~~~~~~~~~~~~~~~~l----~~i~~s~~~L~~Li~~ 307 (495)
T Consensus 132 ~~~Lrqe~E~L~e~~r~K~~Fla~vSHELRTPLTaI~g~~e~L~~~~~~~~-~~~~~~~l~~l~~~~~~~~~~L~~LI~D 210 (378)
T PRK09303 132 LFVLRQENETLLEQLKFKDRLLAMLAHDLRTPLTAASLAVETLELGQIDPS-EELSPALIEQLQDQARRQLEEIERLITD 210 (378)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999899999999999999997367615319999999999864257974-1667999999999999999999999999
Q ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 99998742200156531011999999999999999973112210003676101047989999887776556886067988
Q gi|254780701|r 308 ILDLSRIEAGRYELSESAISLIDIVRECIIMLQLRAQEKNIEIFQKIDPSLSSVWADEKGMRQVILNLLSNAVKFTAIGG 387 (495)
Q Consensus 308 lLdlsrleag~~~l~~~~v~L~~li~~~~~~~~~~A~~~~~~l~~~~~~~~~~v~~D~~~L~qvl~NLi~NAiK~T~~gG 387 (495)
T Consensus 211 LLd~sr~e~g~l~l~~~~~dL~~lv~evi~~~~~~a~~k~i~l~~dip~dlp~V~aD~~rL~QVl~NLL~NAiKyT~~gG 290 (378)
T PRK09303 211 LLEVGRTRWEALQFNPQKLDLGSLCQEVILELEKRWLAKSLEIQTDIPSDLPSVYADQRRIRQVLLNLLDNAIKYTPEGG 290 (378)
T ss_pred HHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 99998875388631468876999999999998989983897899976899972876899999999999999998589998
Q ss_pred EEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEE
Q ss_conf 79999999769859999987899789878544226523157776789998880589999999961985999979899529
Q gi|254780701|r 388 RVHVTVGWTSGRGQYISIKDNGPGIAEGEIPTVLTSFGQGSIAIKSAEQGVGLGLPIAQSIMANHGGQFLIRSKLREGVE 467 (495)
Q Consensus 388 ~V~v~~~~~~~~~~~i~V~DtG~GI~~e~~~~iF~~F~r~~~~~~~~~~GtGLGLaIvk~lve~hgG~i~v~S~~G~Gt~ 467 (495)
T Consensus 291 ~I~I~~~~~~~~~V~isV~DtG~GIp~e~~~rIFe~F~R~~~s--~~~~GtGLGLaIvk~IVe~HgG~I~V~S~~g~GS~ 368 (378)
T PRK09303 291 TITLTMLHRTTQKVQVSICDTGPGIPEEEQERIFEDRVRLPRD--EGTEGYGIGLSVCRRIVEVHYGQIWVDSEPGQGSC 368 (378)
T ss_pred EEEEEEEEECCCEEEEEEEEECCCCCHHHHHHHCCCCEECCCC--CCCCCEEHHHHHHHHHHHHCCCEEEEEECCCCCEE
T ss_conf 6999999813998999999807888989998756363445689--99883127999999999987997999943998359
Q ss_pred EEEEECHHH
Q ss_conf 889847247
Q gi|254780701|r 468 VIAILPNTR 476 (495)
Q Consensus 468 f~v~LP~~~ 476 (495)
T Consensus 369 Ft~tLPv~r 377 (378)
T PRK09303 369 FHFTLPVYR 377 (378)
T ss_pred EEEEEECCC
T ss_conf 999982478