HHsearch alignment for GI: 254780701 and conserved domain: PRK09467

>PRK09467 envZ osmolarity sensor protein; Provisional.
Probab=100.00  E-value=1.4e-40  Score=366.90  Aligned_cols=229  Identities=24%  Similarity=0.394  Sum_probs=191.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999999999889999977642013899999999985033687893789999999999999999999
Q gi|254780701|r  226 AELEVAKSLSDETRKRAEEENLAKSRFLASMSHELRTPLNAILGFSEVIELETMGPLNNETYKEYIGDIHRSGQHLLNLI  305 (495)
Q Consensus       226 ~~l~~~~~~~~~a~~~ae~a~~~Ks~FlA~~SHELRTPL~aI~g~~elL~~~~~~~~~~~~~~~~l~~i~~s~~~L~~Li  305 (495)
T Consensus       208 ~Ev~~l~~aFN~M~~~l~~~~~~r~~~la~vSHeLRTPLT~irl~~e~l~~~------~~---~~~~~i~~~i~~m~~li  278 (437)
T PRK09467        208 SEVRSVTRAFNQMSAGIKQLEDDRALLMAGVSHDLRTPLTRIRLATEMMSEE------DG---YLAESINKDIEECNAII  278 (437)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC------HH---HHHHHHHHHHHHHHHHH
T ss_conf             8999999999999999999999999999753444327899999998746753------18---99999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             99999987422001565310119999999999999999731122100036761010479899998877765568860679
Q gi|254780701|r  306 NEILDLSRIEAGRYELSESAISLIDIVRECIIMLQLRAQEKNIEIFQKIDPSLSSVWADEKGMRQVILNLLSNAVKFTAI  385 (495)
Q Consensus       306 ~~lLdlsrleag~~~l~~~~v~L~~li~~~~~~~~~~A~~~~~~l~~~~~~~~~~v~~D~~~L~qvl~NLi~NAiK~T~~  385 (495)
T Consensus       279 ~~~L~~~r~~~---~~~~~~~dl~~l~~~~~~~~~----~~~~~i~~~~~~~~~~v~~d~~~l~r~l~NLi~NA~ky~--  349 (437)
T PRK09467        279 EQFIDYLRTDQ---EMPMEMADLNALLGEVIAAES----GYEREIETALYPGPIEVPMNPIAIKRALANLVVNAARYG--  349 (437)
T ss_pred             HHHHHHHHHCC---CCCCCCCCHHHHHHHHHHHHH----CCCCEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHCC--
T ss_conf             99999986215---566751159999999999875----549838996288764898579999999999999887607--


Q ss_pred             CCEEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCC
Q ss_conf             88799999997698599999878997898785442265231577767899988805899999999619859999798995
Q gi|254780701|r  386 GGRVHVTVGWTSGRGQYISIKDNGPGIAEGEIPTVLTSFGQGSIAIKSAEQGVGLGLPIAQSIMANHGGQFLIRSKLREG  465 (495)
Q Consensus       386 gG~V~v~~~~~~~~~~~i~V~DtG~GI~~e~~~~iF~~F~r~~~~~~~~~~GtGLGLaIvk~lve~hgG~i~v~S~~G~G  465 (495)
T Consensus       350 ~~~i~V~~~~-~~~~~~i~V~D~GpGI~~e~l~~if~pF~R~d~sR~--~~GsGLGLaIv~~Iv~~HgG~i~l~~~~~gG  426 (437)
T PRK09467        350 NGWIKVSSGT-EGNRAWFQVEDNGPGIPEEQIKHLFQPFTRGDSARG--SSGTGLGLAIVKRIVDQHQGKVELGNREEGG  426 (437)
T ss_pred             CCEEEEEEEE-ECCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCC--CCCEEHHHHHHHHHHHHCCCEEEEEECCCCC
T ss_conf             9839999998-689999999975999998999876168521888999--9977288999999999869989999779994


Q ss_pred             EEEEEEECHH
Q ss_conf             2988984724
Q gi|254780701|r  466 VEVIAILPNT  475 (495)
Q Consensus       466 t~f~v~LP~~  475 (495)
T Consensus       427 l~~~i~lPl~  436 (437)
T PRK09467        427 LSARAWLPLP  436 (437)
T ss_pred             EEEEEEECCC
T ss_conf             5999997157