HHsearch alignment for GI: 254780701 and conserved domain: PRK09959
>PRK09959 hybrid sensory histidine kinase in two-component regulatory system with EvgA; Provisional.
Probab=100.00 E-value=0 Score=512.90 Aligned_cols=248 Identities=31% Similarity=0.438 Sum_probs=218.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999988999997764201389999999998503368789378999999999999999999
Q gi|254780701|r 225 IAELEVAKSLSDETRKRAEEENLAKSRFLASMSHELRTPLNAILGFSEVIELETMGPLNNETYKEYIGDIHRSGQHLLNL 304 (495)
Q Consensus 225 ~~~l~~~~~~~~~a~~~ae~a~~~Ks~FlA~~SHELRTPL~aI~g~~elL~~~~~~~~~~~~~~~~l~~i~~s~~~L~~L 304 (495)
T Consensus 688 ITerk~~e~~L~~Ak~~Ae~An~AKS~FLA~MSHEIRTPLn~IiG~~eLL~~~~l---~~~q~~~~l~~~~~Sa~~LL~L 764 (1197)
T PRK09959 688 ITETRDLIHALEVERNKAINATVAKSQFLATMSHEIRTPISSIMGFLELLSGSGL---SKEQRVEAISLAYATGQSLLGL 764 (1197)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHCCCC---CHHHHHHHHHHHHHHHHHHHHH
T ss_conf 1289999999999999999998888888874735316568999999999846899---9899999999999999999998
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCC-CCHHCCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf 9999999874220015653101199999999999999997311221000367-610104798999988777655688606
Q gi|254780701|r 305 INEILDLSRIEAGRYELSESAISLIDIVRECIIMLQLRAQEKNIEIFQKIDP-SLSSVWADEKGMRQVILNLLSNAVKFT 383 (495)
Q Consensus 305 i~~lLdlsrleag~~~l~~~~v~L~~li~~~~~~~~~~A~~~~~~l~~~~~~-~~~~v~~D~~~L~qvl~NLi~NAiK~T 383 (495)
T Consensus 765 InDILD~SKIEaG~l~l~~~~~~l~~li~~v~~~~~~~A~~K~l~l~~~~~~p~~~~v~~D~~Rl~QIL~NLlsNAIKFT 844 (1197)
T PRK09959 765 IGEILDVDKIESGNYQLQPQWVDIPTLVQNTCHSFGAIAASKSIALSCSSTFPEHYLVKIDPQAFKQVLSNLLSNALKFT 844 (1197)
T ss_pred HHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEECCCHHHHHHHHHHHHHHHCCCC
T ss_conf 88889998985388621452017999999999999999996796899955898751352678899999999987537468
Q ss_pred CCCCEEEEEEEEE--CCC--EEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEE
Q ss_conf 7988799999997--698--599999878997898785442265231577767899988805899999999619859999
Q gi|254780701|r 384 AIGGRVHVTVGWT--SGR--GQYISIKDNGPGIAEGEIPTVLTSFGQGSIAIKSAEQGVGLGLPIAQSIMANHGGQFLIR 459 (495)
Q Consensus 384 ~~gG~V~v~~~~~--~~~--~~~i~V~DtG~GI~~e~~~~iF~~F~r~~~~~~~~~~GtGLGLaIvk~lve~hgG~i~v~ 459 (495)
T Consensus 845 ~~-G~V~i~~~~~~~~~~~~~l~~~V~DTGiGI~~~~~~~iF~pF~Q~s~--~r~~~GTGLGLaI~k~LvelMgG~I~v~ 921 (1197)
T PRK09959 845 TE-GAVKITTSLGHIDDNHAVIKMTIMDSGSGLSQEEQQQLFKRYSQTSA--GRQQTGSGLGLMICKELIKNMQGDLSLE 921 (1197)
T ss_pred CC-CEEEEEEEEEECCCCEEEEEEEEEECCCCCCHHHHHHHCCCCCCCCC--CCCCCCCCCHHHHHHHHHHHCCCEEEEE
T ss_conf 79-78999999865179806999999977878898899753678624778--8788984835999999999879928999
Q ss_pred EECCCCEEEEEEECHHHCC
Q ss_conf 7989952988984724707
Q gi|254780701|r 460 SKLREGVEVIAILPNTRVL 478 (495)
Q Consensus 460 S~~G~Gt~f~v~LP~~~~~ 478 (495)
T Consensus 922 S~~G~GS~F~~~lpl~~~~ 940 (1197)
T PRK09959 922 SHPGIGTTFTITIPVEISQ 940 (1197)
T ss_pred ECCCCCEEEEEEEECCCCC
T ss_conf 3599944999999756455