HHsearch alignment for GI: 254780701 and conserved domain: PRK10549
>PRK10549 signal transduction histidine-protein kinase BaeS; Provisional.
Probab=100.00 E-value=0 Score=425.45 Aligned_cols=246 Identities=23% Similarity=0.380 Sum_probs=218.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999998899999776420138999999999850336878937899999999999999999999
Q gi|254780701|r 227 ELEVAKSLSDETRKRAEEENLAKSRFLASMSHELRTPLNAILGFSEVIELETMGPLNNETYKEYIGDIHRSGQHLLNLIN 306 (495)
Q Consensus 227 ~l~~~~~~~~~a~~~ae~a~~~Ks~FlA~~SHELRTPL~aI~g~~elL~~~~~~~~~~~~~~~~l~~i~~s~~~L~~Li~ 306 (495)
T Consensus 219 Eig~La~~fN~Ma~~Le~~~~~rr~f~a~iSHELRTPLt~i~g~le~l~d~~~-----~~~~e~l~~i~~e~~rl~~Lv~ 293 (467)
T PRK10549 219 ELGKLAQDFNQLASTLEKNQQMRRDFMADISHELRTPLAVLRGELEAIQDGVR-----KFTPESVASLQAEVGTLTKLVD 293 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCC-----CCCHHHHHHHHHHHHHHHHHHH
T ss_conf 79999999999999999999999999998888751589999999999871655-----4579999999999999999999
Q ss_pred HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 99999874220015653101199999999999999997311221000367610104798999988777655688606798
Q gi|254780701|r 307 EILDLSRIEAGRYELSESAISLIDIVRECIIMLQLRAQEKNIEIFQKIDPSLSSVWADEKGMRQVILNLLSNAVKFTAIG 386 (495)
Q Consensus 307 ~lLdlsrleag~~~l~~~~v~L~~li~~~~~~~~~~A~~~~~~l~~~~~~~~~~v~~D~~~L~qvl~NLi~NAiK~T~~g 386 (495)
T Consensus 294 dLl~ls~~~~~~~~~~~~~vdl~~ll~~~~~~~~~~~~~~~i~l~~~~~~~-~~v~~D~~~L~qvl~NLl~NAikyt~~~ 372 (467)
T PRK10549 294 DLHQLSLSDEGALAYQKTPVDLVPLLEVAGGAFRERFASRGLTLQFSLPDS-ATVFGDPDRLMQLFNNLLENSLRYTDSG 372 (467)
T ss_pred HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCC-CEEEECHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 999998754567544673333899999999999999984595899975988-4699779999999999999999848999
Q ss_pred CEEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCE
Q ss_conf 87999999976985999998789978987854422652315777678999888058999999996198599997989952
Q gi|254780701|r 387 GRVHVTVGWTSGRGQYISIKDNGPGIAEGEIPTVLTSFGQGSIAIKSAEQGVGLGLPIAQSIMANHGGQFLIRSKLREGV 466 (495)
Q Consensus 387 G~V~v~~~~~~~~~~~i~V~DtG~GI~~e~~~~iF~~F~r~~~~~~~~~~GtGLGLaIvk~lve~hgG~i~v~S~~G~Gt 466 (495)
T Consensus 373 g~I~I~~~~-~~~~v~i~V~D~G~GI~~e~l~~IFe~Fyr~d~sr~r~~gGsGLGLaIvk~Iv~~HgG~I~v~s~~~~G~ 451 (467)
T PRK10549 373 GSLHISAEQ-HDKTLRLTFADSAPGVSDEQLQKLFERFYRTEGSRNRASGGSGLGLAICLNIVEAHNGRIIAAHSPFGGV 451 (467)
T ss_pred CEEEEEEEE-ECCEEEEEEEEECCCCCHHHHHHHCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCEE
T ss_conf 879999999-7999999999818887989999866898738888889999612899999999998399899996799857
Q ss_pred EEEEEECHHHCCC
Q ss_conf 9889847247074
Q gi|254780701|r 467 EVIAILPNTRVLN 479 (495)
Q Consensus 467 ~f~v~LP~~~~~~ 479 (495)
T Consensus 452 ~f~i~LPl~~~~~ 464 (467)
T PRK10549 452 SITVELPLERDLQ 464 (467)
T ss_pred EEEEEEECCCCCC
T ss_conf 9999952799988