HHsearch alignment for GI: 254780701 and conserved domain: PRK10815

>PRK10815 sensor protein PhoQ; Provisional.
Probab=100.00  E-value=4.3e-41  Score=371.17  Aligned_cols=240  Identities=19%  Similarity=0.224  Sum_probs=205.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999999999889999977642013899999999985033687893789999999999999999999
Q gi|254780701|r  226 AELEVAKSLSDETRKRAEEENLAKSRFLASMSHELRTPLNAILGFSEVIELETMGPLNNETYKEYIGDIHRSGQHLLNLI  305 (495)
Q Consensus       226 ~~l~~~~~~~~~a~~~ae~a~~~Ks~FlA~~SHELRTPL~aI~g~~elL~~~~~~~~~~~~~~~~l~~i~~s~~~L~~Li  305 (495)
T Consensus       243 ~Ei~~La~~fN~ml~rl~~~~~rqr~F~adaSHELRTPLa~l~~~le~L~~~~~---~~~---~~~~~~le~i~Rl~~li  316 (484)
T PRK10815        243 RELTSLVRNLNRLLKSERERYDKYRTTLTDLTHSLKTPLAVLQSTLRSLRTEKM---SVS---DAEPVMLEQISRISQQI  316 (484)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHCCCC---CHH---HHHHHHHHHHHHHHHHH
T ss_conf             899999999999999999999999999854436434569999999999746998---878---99999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             99999987422001565310119999999999999999731122100036761010479899998877765568860679
Q gi|254780701|r  306 NEILDLSRIEAGRYELSESAISLIDIVRECIIMLQLRAQEKNIEIFQKIDPSLSSVWADEKGMRQVILNLLSNAVKFTAI  385 (495)
Q Consensus       306 ~~lLdlsrleag~~~l~~~~v~L~~li~~~~~~~~~~A~~~~~~l~~~~~~~~~~v~~D~~~L~qvl~NLi~NAiK~T~~  385 (495)
T Consensus       317 ~~lL~~a~~~~~~~~~~~e~~~l~~ll~~l~~~l~~~~~~k~i~l~~~~~~~~-~~~gd~~~l~~~l~NLldNAikys~~  395 (484)
T PRK10815        317 GYYLHRASMRGEGTLLSRELHPVAPLLDNLTSALNKVYQRKGVNISLDISPEI-SFVGEQNDFMEVMGNVLDNACKYCLE  395 (484)
T ss_pred             HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCE-EEECCHHHHHHHHHHHHHHHHHHCCC
T ss_conf             99999987038986302555669999999999999999964977999648760-79557899999999999999972888


Q ss_pred             CCEEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCC
Q ss_conf             88799999997698599999878997898785442265231577767899988805899999999619859999798995
Q gi|254780701|r  386 GGRVHVTVGWTSGRGQYISIKDNGPGIAEGEIPTVLTSFGQGSIAIKSAEQGVGLGLPIAQSIMANHGGQFLIRSKLREG  465 (495)
Q Consensus       386 gG~V~v~~~~~~~~~~~i~V~DtG~GI~~e~~~~iF~~F~r~~~~~~~~~~GtGLGLaIvk~lve~hgG~i~v~S~~G~G  465 (495)
T Consensus       396 ~--v~I~~~~-~~~~~~I~V~D~GpGIp~e~~~~IFeRF~R~d~~r----~GsGLGLaIvk~Iv~~hgG~I~l~~s~~gG  468 (484)
T PRK10815        396 F--VEISARQ-TDEHLHIVVEDDGPGIPESKRELIFDRGQRVDTLR----PGQGVGLAVAREITEQYEGKIVASESPLGG  468 (484)
T ss_pred             C--EEEEEEE-ECCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCC----CCCCHHHHHHHHHHHHCCCEEEEEECCCCC
T ss_conf             6--7999999-69999999997399999899986246887799999----985767999999999889989999569992


Q ss_pred             EEEEEEECHHHCCC
Q ss_conf             29889847247074
Q gi|254780701|r  466 VEVIAILPNTRVLN  479 (495)
Q Consensus       466 t~f~v~LP~~~~~~  479 (495)
T Consensus       469 ~~f~I~F~~~~~~p  482 (484)
T PRK10815        469 ARMEVIFGRQHSTP  482 (484)
T ss_pred             EEEEEEECCCCCCC
T ss_conf             48999973877899