HHsearch alignment for GI: 254780701 and conserved domain: PRK10841
>PRK10841 hybrid sensory kinase in two-component regulatory system with RcsB and YojN; Provisional.
Probab=100.00 E-value=0 Score=553.29 Aligned_cols=245 Identities=27% Similarity=0.413 Sum_probs=229.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999998899999776420138999999999850336878937899999999999999999999
Q gi|254780701|r 227 ELEVAKSLSDETRKRAEEENLAKSRFLASMSHELRTPLNAILGFSEVIELETMGPLNNETYKEYIGDIHRSGQHLLNLIN 306 (495)
Q Consensus 227 ~l~~~~~~~~~a~~~ae~a~~~Ks~FlA~~SHELRTPL~aI~g~~elL~~~~~~~~~~~~~~~~l~~i~~s~~~L~~Li~ 306 (495)
T Consensus 448 ar~~~e~~L~~a~~AAE~AN~AKS~FLAnMSHEIRTPLnGIlG~lELL~~t~L----~~~Qr~~l~tI~~Ss~~LL~lIN 523 (947)
T PRK10841 448 ARVKMEESLQEMAQAAEQASQSKSMFLATVSHELRTPLYGIIGNLDLLQTKEL----PKGVDRLVTAMNNSSSLLLKIIS 523 (947)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHHHHHHHHHHHCCCCC----CHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 78999999999999999999999899875856436128999999999807999----98999999999999999999999
Q ss_pred HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCH-HCCCCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99999874220015653101199999999999999997311221000367610-10479899998877765568860679
Q gi|254780701|r 307 EILDLSRIEAGRYELSESAISLIDIVRECIIMLQLRAQEKNIEIFQKIDPSLS-SVWADEKGMRQVILNLLSNAVKFTAI 385 (495)
Q Consensus 307 ~lLdlsrleag~~~l~~~~v~L~~li~~~~~~~~~~A~~~~~~l~~~~~~~~~-~v~~D~~~L~qvl~NLi~NAiK~T~~ 385 (495)
T Consensus 524 DILDfSKIEAGkl~Le~~~F~l~~lv~~v~~~~~~~A~~K~L~L~~~idp~vP~~v~GDp~RLrQIL~NLLsNAIKFT~~ 603 (947)
T PRK10841 524 DILDFSKIESEQLKIEPREFSPREVMNHITANYLPLVVKKQLGLYCFIEPDVPVSLNGDPMRLQQVISNLLSNAIKFTDT 603 (947)
T ss_pred HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEECHHHHHHHHHHHHHHHEEECCC
T ss_conf 99999988049847985256899999999999999999739879999799999658606889999999988777466799
Q ss_pred CCEEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCC
Q ss_conf 88799999997698599999878997898785442265231577767899988805899999999619859999798995
Q gi|254780701|r 386 GGRVHVTVGWTSGRGQYISIKDNGPGIAEGEIPTVLTSFGQGSIAIKSAEQGVGLGLPIAQSIMANHGGQFLIRSKLREG 465 (495)
Q Consensus 386 gG~V~v~~~~~~~~~~~i~V~DtG~GI~~e~~~~iF~~F~r~~~~~~~~~~GtGLGLaIvk~lve~hgG~i~v~S~~G~G 465 (495)
T Consensus 604 -G~I~L~V~~-~~~~L~fsV~DTGIGIsee~~~~LFepF~QaD~S~tR~yGGTGLGLAI~krLVeLMGG~I~VeSe~G~G 681 (947)
T PRK10841 604 -GCIILHVRV-DGDYLSFRVRDTGVGIPAKEVVRLFDPFFQVGTGVQRNFQGTGLGLAICEKLINMMDGDISVDSEPGMG 681 (947)
T ss_pred -CEEEEEEEE-CCCEEEEEEEECCCCCCHHHHHHHHCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCE
T ss_conf -589999998-499999999982899899999988471115787543457998741999999999759958999169980
Q ss_pred EEEEEEECHHHC
Q ss_conf 298898472470
Q gi|254780701|r 466 VEVIAILPNTRV 477 (495)
Q Consensus 466 t~f~v~LP~~~~ 477 (495)
T Consensus 682 StFtf~LPL~~~ 693 (947)
T PRK10841 682 SQFTVRIPLYGA 693 (947)
T ss_pred EEEEEEEECCCC
T ss_conf 799999756433