HHsearch alignment for GI: 254780701 and conserved domain: PRK11100

>PRK11100 sensory histidine kinase CreC; Provisional.
Probab=100.00  E-value=0  Score=421.12  Aligned_cols=239  Identities=26%  Similarity=0.439  Sum_probs=208.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999999988999997764201389999999998503368789378999999999999999999999
Q gi|254780701|r  228 LEVAKSLSDETRKRAEEENLAKSRFLASMSHELRTPLNAILGFSEVIELETMGPLNNETYKEYIGDIHRSGQHLLNLINE  307 (495)
Q Consensus       228 l~~~~~~~~~a~~~ae~a~~~Ks~FlA~~SHELRTPL~aI~g~~elL~~~~~~~~~~~~~~~~l~~i~~s~~~L~~Li~~  307 (495)
T Consensus       236 i~~La~a~n~M~~~Le~~-~~~e~fva~vSHELRTPLt~I~g~~ElL~~~~----~~e~~~~~l~~I~~e~~RL~~LV~~  310 (475)
T PRK11100        236 LRDLAQALESMRVKLEGK-AYVEQYVQTLTHELKSPLAAIRGAAELLQEDP----PPEDRQRFTGNILAQSARLQQLIDR  310 (475)
T ss_pred             HHHHHHHHHHHHHHHHHH-HHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCC----CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999999999999979-99999998540865117999999999973899----9899999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             99998742200156531011999999999999999973112210003676101047989999887776556886067988
Q gi|254780701|r  308 ILDLSRIEAGRYELSESAISLIDIVRECIIMLQLRAQEKNIEIFQKIDPSLSSVWADEKGMRQVILNLLSNAVKFTAIGG  387 (495)
Q Consensus       308 lLdlsrleag~~~l~~~~v~L~~li~~~~~~~~~~A~~~~~~l~~~~~~~~~~v~~D~~~L~qvl~NLi~NAiK~T~~gG  387 (495)
T Consensus       311 LL~larle~~~~~~~~~~vdl~~ll~~~~~~~~~~~~~~~i~l~~~~~--~~~v~~D~~~L~qvl~NLl~NAikys~~~g  388 (475)
T PRK11100        311 LLELARLEQRQELEVLEPVALAALLEELVEAREAQAAAKGITLRLRPD--DAAVLGDPFLLRQALGNLLDNAIDFTPEGG  388 (475)
T ss_pred             HHHHHHHHCCCCCCCCEEECHHHHHHHHHHHHHHHHHHCCEEEEEECC--CCEEEECHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             999987515887675548759999999999999999868929999578--766970899999999999999997389997


Q ss_pred             EEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEE
Q ss_conf             79999999769859999987899789878544226523157776789998880589999999961985999979899529
Q gi|254780701|r  388 RVHVTVGWTSGRGQYISIKDNGPGIAEGEIPTVLTSFGQGSIAIKSAEQGVGLGLPIAQSIMANHGGQFLIRSKLREGVE  467 (495)
Q Consensus       388 ~V~v~~~~~~~~~~~i~V~DtG~GI~~e~~~~iF~~F~r~~~~~~~~~~GtGLGLaIvk~lve~hgG~i~v~S~~G~Gt~  467 (495)
T Consensus       389 ~I~I~~~~-~~~~~~i~V~D~G~GIp~e~l~~IFerFys~~r~~~-~~~GsGLGLsIvk~Iv~~HgG~I~v~s~~~~Gt~  466 (475)
T PRK11100        389 TITLSAER-DGEQVALSVEDSGPGIPDYALPRIFERFYSLPRPAN-GRKSTGLGLAFVREVARLHGGEVTLRNRPEGGVL  466 (475)
T ss_pred             EEEEEEEE-ECCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHCCCEEEEEECCCCEEE
T ss_conf             79999999-699999999984888788999886167803777999-9886307999999999985998999966998079


Q ss_pred             EEEEECHH
Q ss_conf             88984724
Q gi|254780701|r  468 VIAILPNT  475 (495)
Q Consensus       468 f~v~LP~~  475 (495)
T Consensus       467 f~i~LP~~  474 (475)
T PRK11100        467 ATLTLPRH  474 (475)
T ss_pred             EEEECCCC
T ss_conf             99993899