HHsearch alignment for GI: 254780701 and conserved domain: PRK11100
>PRK11100 sensory histidine kinase CreC; Provisional.
Probab=100.00 E-value=0 Score=421.12 Aligned_cols=239 Identities=26% Similarity=0.439 Sum_probs=208.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999988999997764201389999999998503368789378999999999999999999999
Q gi|254780701|r 228 LEVAKSLSDETRKRAEEENLAKSRFLASMSHELRTPLNAILGFSEVIELETMGPLNNETYKEYIGDIHRSGQHLLNLINE 307 (495)
Q Consensus 228 l~~~~~~~~~a~~~ae~a~~~Ks~FlA~~SHELRTPL~aI~g~~elL~~~~~~~~~~~~~~~~l~~i~~s~~~L~~Li~~ 307 (495)
T Consensus 236 i~~La~a~n~M~~~Le~~-~~~e~fva~vSHELRTPLt~I~g~~ElL~~~~----~~e~~~~~l~~I~~e~~RL~~LV~~ 310 (475)
T PRK11100 236 LRDLAQALESMRVKLEGK-AYVEQYVQTLTHELKSPLAAIRGAAELLQEDP----PPEDRQRFTGNILAQSARLQQLIDR 310 (475)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCC----CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999979-99999998540865117999999999973899----9899999999999999999999999
Q ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 99998742200156531011999999999999999973112210003676101047989999887776556886067988
Q gi|254780701|r 308 ILDLSRIEAGRYELSESAISLIDIVRECIIMLQLRAQEKNIEIFQKIDPSLSSVWADEKGMRQVILNLLSNAVKFTAIGG 387 (495)
Q Consensus 308 lLdlsrleag~~~l~~~~v~L~~li~~~~~~~~~~A~~~~~~l~~~~~~~~~~v~~D~~~L~qvl~NLi~NAiK~T~~gG 387 (495)
T Consensus 311 LL~larle~~~~~~~~~~vdl~~ll~~~~~~~~~~~~~~~i~l~~~~~--~~~v~~D~~~L~qvl~NLl~NAikys~~~g 388 (475)
T PRK11100 311 LLELARLEQRQELEVLEPVALAALLEELVEAREAQAAAKGITLRLRPD--DAAVLGDPFLLRQALGNLLDNAIDFTPEGG 388 (475)
T ss_pred HHHHHHHHCCCCCCCCEEECHHHHHHHHHHHHHHHHHHCCEEEEEECC--CCEEEECHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 999987515887675548759999999999999999868929999578--766970899999999999999997389997
Q ss_pred EEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEE
Q ss_conf 79999999769859999987899789878544226523157776789998880589999999961985999979899529
Q gi|254780701|r 388 RVHVTVGWTSGRGQYISIKDNGPGIAEGEIPTVLTSFGQGSIAIKSAEQGVGLGLPIAQSIMANHGGQFLIRSKLREGVE 467 (495)
Q Consensus 388 ~V~v~~~~~~~~~~~i~V~DtG~GI~~e~~~~iF~~F~r~~~~~~~~~~GtGLGLaIvk~lve~hgG~i~v~S~~G~Gt~ 467 (495)
T Consensus 389 ~I~I~~~~-~~~~~~i~V~D~G~GIp~e~l~~IFerFys~~r~~~-~~~GsGLGLsIvk~Iv~~HgG~I~v~s~~~~Gt~ 466 (475)
T PRK11100 389 TITLSAER-DGEQVALSVEDSGPGIPDYALPRIFERFYSLPRPAN-GRKSTGLGLAFVREVARLHGGEVTLRNRPEGGVL 466 (475)
T ss_pred EEEEEEEE-ECCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHCCCEEEEEECCCCEEE
T ss_conf 79999999-699999999984888788999886167803777999-9886307999999999985998999966998079
Q ss_pred EEEEECHH
Q ss_conf 88984724
Q gi|254780701|r 468 VIAILPNT 475 (495)
Q Consensus 468 f~v~LP~~ 475 (495)
T Consensus 467 f~i~LP~~ 474 (475)
T PRK11100 467 ATLTLPRH 474 (475)
T ss_pred EEEECCCC
T ss_conf 99993899