HHsearch alignment for GI: 254780701 and conserved domain: PRK11360
>PRK11360 sensory histidine kinase AtoS; Provisional.
Probab=100.00 E-value=0 Score=417.80 Aligned_cols=219 Identities=29% Similarity=0.458 Sum_probs=200.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 98899999776420138999999999850336878937899999999999999999999999998742200156531011
Q gi|254780701|r 248 AKSRFLASMSHELRTPLNAILGFSEVIELETMGPLNNETYKEYIGDIHRSGQHLLNLINEILDLSRIEAGRYELSESAIS 327 (495)
Q Consensus 248 ~Ks~FlA~~SHELRTPL~aI~g~~elL~~~~~~~~~~~~~~~~l~~i~~s~~~L~~Li~~lLdlsrleag~~~l~~~~v~ 327 (495)
T Consensus 387 alGe~~A~vaHElRnPLt~I~g~~elL~~~~----~~~~~~~~l~~i~~e~~Rl~~li~~lL~~sr~~~~----~~~~v~ 458 (607)
T PRK11360 387 ALGELMAGVAHEIRNPLTAIRGYVQILRQQT----SDPIHQEYLSVVLREVDSLNKVIQQLLEFSRPRHS----QWQQVS 458 (607)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC----CCCEEC
T ss_conf 9999999989987154999999999986689----98799999999999999999999999985277888----884786
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCEEEEEEEE
Q ss_conf 99999999999999997311221000367610104798999988777655688606798879999999769859999987
Q gi|254780701|r 328 LIDIVRECIIMLQLRAQEKNIEIFQKIDPSLSSVWADEKGMRQVILNLLSNAVKFTAIGGRVHVTVGWTSGRGQYISIKD 407 (495)
Q Consensus 328 L~~li~~~~~~~~~~A~~~~~~l~~~~~~~~~~v~~D~~~L~qvl~NLi~NAiK~T~~gG~V~v~~~~~~~~~~~i~V~D 407 (495)
T Consensus 459 l~~l~~~~~~~~~~~~~~~~i~l~~~~~~~~~~v~~D~~~l~qvl~NLi~NAi~a~~~~g~I~i~~~~~~~~~v~i~V~D 538 (607)
T PRK11360 459 LNALVEEVLVLVQTAGVQARVDFITELDNELPPINADRELLKQVLLNILINAVQAISARGKIRIRTWQYSDSQQAISIED 538 (607)
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEEE
T ss_conf 99999999999999888679689998189887699888999999999999962862899679999999369879999998
Q ss_pred CCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECHHHCCCC
Q ss_conf 8997898785442265231577767899988805899999999619859999798995298898472470746
Q gi|254780701|r 408 NGPGIAEGEIPTVLTSFGQGSIAIKSAEQGVGLGLPIAQSIMANHGGQFLIRSKLREGVEVIAILPNTRVLNF 480 (495)
Q Consensus 408 tG~GI~~e~~~~iF~~F~r~~~~~~~~~~GtGLGLaIvk~lve~hgG~i~v~S~~G~Gt~f~v~LP~~~~~~~ 480 (495)
T Consensus 539 ~G~GI~~e~~~~IFepF~t------tk~~GtGLGLaI~k~Ive~hgG~I~v~S~~g~GT~F~i~LPl~~~~~~ 605 (607)
T PRK11360 539 NGCGIDLELLKKIFDPFFT------TKASGTGLGLALSQRIINAHQGDIRVASLPGYGTTFTLILPINPQGNQ 605 (607)
T ss_pred CCCCCCHHHHHHHCCCCCC------CCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEECCCCCCC
T ss_conf 6768698999645589754------899981337999999999889989999669998699999806898889