HHsearch alignment for GI: 254780701 and conserved domain: PRK13560

>PRK13560 hypothetical protein; Provisional.
Probab=99.81  E-value=1.2e-16  Score=161.48  Aligned_cols=206  Identities=18%  Similarity=0.224  Sum_probs=144.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999889999977642013899999999985033687893789999999999999999999999999874220
Q gi|254780701|r  238 TRKRAEEENLAKSRFLASMSHELRTPLNAILGFSEVIELETMGPLNNETYKEYIGDIHRSGQHLLNLINEILDLSRIEAG  317 (495)
Q Consensus       238 a~~~ae~a~~~Ks~FlA~~SHELRTPL~aI~g~~elL~~~~~~~~~~~~~~~~l~~i~~s~~~L~~Li~~lLdlsrleag  317 (495)
T Consensus       594 aee~l~asL~EKE~LLkEIHHRVKNNLQiIsSLL~LQar~~----~d~ear~aL~esq~RI~SmA-lVHe~Ly~S-----  663 (807)
T PRK13560        594 AEEKIKAALTEKEVLLKEIHHRVKNNLQIISSLLDLQAEKL----HDEEAKCAFAESQDRICAMA-LAHEKLYQS-----  663 (807)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----CCHHHHHHHHHHHHHHHHHH-HHHHHHHCC-----
T ss_conf             99999999998899999877675203999999999887655----99999999999999999999-999998569-----


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHC--CCCCEECCCCCCHHCCCCH-HHHHHHHHHHHHHHHHCCCC---CCEEEE
Q ss_conf             01565310119999999999999999731--1221000367610104798-99998877765568860679---887999
Q gi|254780701|r  318 RYELSESAISLIDIVRECIIMLQLRAQEK--NIEIFQKIDPSLSSVWADE-KGMRQVILNLLSNAVKFTAI---GGRVHV  391 (495)
Q Consensus       318 ~~~l~~~~v~L~~li~~~~~~~~~~A~~~--~~~l~~~~~~~~~~v~~D~-~~L~qvl~NLi~NAiK~T~~---gG~V~v  391 (495)
T Consensus       664 ---~dl~~Id~~~yi~~L~~~L~~s~~~~~~~I~l~vd~d--~~~L~~d~AiPLgLIlnELVtNAlKHAF~~~~~G~I~I  738 (807)
T PRK13560        664 ---EDLADIDFLDYIESLTAHLKNSFAIDFGRIDCKIDAD--DGCLDIDKAIPCGLIISELLSNALKHAFPDGAAGNIKV  738 (807)
T ss_pred             ---CCCCEECHHHHHHHHHHHHHHHHCCCCCEEEEEEECC--CCEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
T ss_conf             ---9976572999999999999997378986389999736--70565888767999999999998986089999827999


Q ss_pred             EEEEECCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEEEE
Q ss_conf             99997698599999878997898785442265231577767899988805899999999619859999798995298898
Q gi|254780701|r  392 TVGWTSGRGQYISIKDNGPGIAEGEIPTVLTSFGQGSIAIKSAEQGVGLGLPIAQSIMANHGGQFLIRSKLREGVEVIAI  471 (495)
Q Consensus       392 ~~~~~~~~~~~i~V~DtG~GI~~e~~~~iF~~F~r~~~~~~~~~~GtGLGLaIvk~lve~hgG~i~v~S~~G~Gt~f~v~  471 (495)
T Consensus       739 sl~~~~~~~v~L~V~DnG~GlP~~-----fd-----------~~~s~sLGL~LV~~Lv~QL~G~l~i~s~--~Gt~f~I~  800 (807)
T PRK13560        739 EIREQGDGMVNLCVADDGIGLPAG-----FD-----------FRAAETLGLQLVCALVKQLDGEIALDSR--GGARFNIR  800 (807)
T ss_pred             EEEECCCCEEEEEEEECCCCCCCC-----CC-----------CCCCCCCHHHHHHHHHHHCCCEEEEECC--CCEEEEEE
T ss_conf             999867998999998798158999-----89-----------7889997699999999974989999859--98699999


Q ss_pred             ECHHH
Q ss_conf             47247
Q gi|254780701|r  472 LPNTR  476 (495)
Q Consensus       472 LP~~~  476 (495)
T Consensus       801 FPl~p  805 (807)
T PRK13560        801 FPMSP  805 (807)
T ss_pred             EECCC
T ss_conf             71899