HHsearch alignment for GI: 254780701 and conserved domain: PRK13560
>PRK13560 hypothetical protein; Provisional.
Probab=99.81 E-value=1.2e-16 Score=161.48 Aligned_cols=206 Identities=18% Similarity=0.224 Sum_probs=144.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999889999977642013899999999985033687893789999999999999999999999999874220
Q gi|254780701|r 238 TRKRAEEENLAKSRFLASMSHELRTPLNAILGFSEVIELETMGPLNNETYKEYIGDIHRSGQHLLNLINEILDLSRIEAG 317 (495)
Q Consensus 238 a~~~ae~a~~~Ks~FlA~~SHELRTPL~aI~g~~elL~~~~~~~~~~~~~~~~l~~i~~s~~~L~~Li~~lLdlsrleag 317 (495)
T Consensus 594 aee~l~asL~EKE~LLkEIHHRVKNNLQiIsSLL~LQar~~----~d~ear~aL~esq~RI~SmA-lVHe~Ly~S----- 663 (807)
T PRK13560 594 AEEKIKAALTEKEVLLKEIHHRVKNNLQIISSLLDLQAEKL----HDEEAKCAFAESQDRICAMA-LAHEKLYQS----- 663 (807)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----CCHHHHHHHHHHHHHHHHHH-HHHHHHHCC-----
T ss_conf 99999999998899999877675203999999999887655----99999999999999999999-999998569-----
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHC--CCCCEECCCCCCHHCCCCH-HHHHHHHHHHHHHHHHCCCC---CCEEEE
Q ss_conf 01565310119999999999999999731--1221000367610104798-99998877765568860679---887999
Q gi|254780701|r 318 RYELSESAISLIDIVRECIIMLQLRAQEK--NIEIFQKIDPSLSSVWADE-KGMRQVILNLLSNAVKFTAI---GGRVHV 391 (495)
Q Consensus 318 ~~~l~~~~v~L~~li~~~~~~~~~~A~~~--~~~l~~~~~~~~~~v~~D~-~~L~qvl~NLi~NAiK~T~~---gG~V~v 391 (495)
T Consensus 664 ---~dl~~Id~~~yi~~L~~~L~~s~~~~~~~I~l~vd~d--~~~L~~d~AiPLgLIlnELVtNAlKHAF~~~~~G~I~I 738 (807)
T PRK13560 664 ---EDLADIDFLDYIESLTAHLKNSFAIDFGRIDCKIDAD--DGCLDIDKAIPCGLIISELLSNALKHAFPDGAAGNIKV 738 (807)
T ss_pred ---CCCCEECHHHHHHHHHHHHHHHHCCCCCEEEEEEECC--CCEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
T ss_conf ---9976572999999999999997378986389999736--70565888767999999999998986089999827999
Q ss_pred EEEEECCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEEEE
Q ss_conf 99997698599999878997898785442265231577767899988805899999999619859999798995298898
Q gi|254780701|r 392 TVGWTSGRGQYISIKDNGPGIAEGEIPTVLTSFGQGSIAIKSAEQGVGLGLPIAQSIMANHGGQFLIRSKLREGVEVIAI 471 (495)
Q Consensus 392 ~~~~~~~~~~~i~V~DtG~GI~~e~~~~iF~~F~r~~~~~~~~~~GtGLGLaIvk~lve~hgG~i~v~S~~G~Gt~f~v~ 471 (495)
T Consensus 739 sl~~~~~~~v~L~V~DnG~GlP~~-----fd-----------~~~s~sLGL~LV~~Lv~QL~G~l~i~s~--~Gt~f~I~ 800 (807)
T PRK13560 739 EIREQGDGMVNLCVADDGIGLPAG-----FD-----------FRAAETLGLQLVCALVKQLDGEIALDSR--GGARFNIR 800 (807)
T ss_pred EEEECCCCEEEEEEEECCCCCCCC-----CC-----------CCCCCCCHHHHHHHHHHHCCCEEEEECC--CCEEEEEE
T ss_conf 999867998999998798158999-----89-----------7889997699999999974989999859--98699999
Q ss_pred ECHHH
Q ss_conf 47247
Q gi|254780701|r 472 LPNTR 476 (495)
Q Consensus 472 LP~~~ 476 (495)
T Consensus 801 FPl~p 805 (807)
T PRK13560 801 FPMSP 805 (807)
T ss_pred EECCC
T ss_conf 71899