HHsearch alignment for GI: 254780701 and conserved domain: cd00075

>cd00075 HATPase_c Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins.

Probab=99.86  E-value=6e-21  Score=198.51  Aligned_cols=102  Identities=38%  Similarity=0.664  Sum_probs=92.2

Q ss_pred             HHHHHHHHHHHHHHCCCC-CCEEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             998877765568860679-8879999999769859999987899789878544226523157776789998880589999
Q gi|254780701|r  368 MRQVILNLLSNAVKFTAI-GGRVHVTVGWTSGRGQYISIKDNGPGIAEGEIPTVLTSFGQGSIAIKSAEQGVGLGLPIAQ  446 (495)
Q Consensus       368 L~qvl~NLi~NAiK~T~~-gG~V~v~~~~~~~~~~~i~V~DtG~GI~~e~~~~iF~~F~r~~~~~~~~~~GtGLGLaIvk  446 (495)
T Consensus         1 l~~vl~nLl~NAik~~~~~~~~I~i~~~~-~~~~~~i~V~D~G~Gi~~~~~~~if~~f~~~~~--~~~~~g~GlGL~i~~   77 (103)
T cd00075           1 LQQVLLNLLSNAIKHTPEGGGRITISVER-DGDHLEIRVEDNGPGIPEEDLERIFERFSDGSR--SRKGGGTGLGLSIVK   77 (103)
T ss_pred             CHHHHHHHHHHHHHHCCCCCCEEEEEEEE-CCCEEEEEEEECCCCCCHHHHHHCCCCCCCCCC--CCCCCCCCCHHHHHH
T ss_conf             96999999999998678999489999998-399999999977994088999760697501788--877898650599999


Q ss_pred             HHHHHCCCEEEEEEECCCCEEEEEEE
Q ss_conf             99996198599997989952988984
Q gi|254780701|r  447 SIMANHGGQFLIRSKLREGVEVIAIL  472 (495)
Q Consensus       447 ~lve~hgG~i~v~S~~G~Gt~f~v~L  472 (495)
T Consensus        78 ~i~~~~~G~i~i~s~~~~Gt~~~i~l  103 (103)
T cd00075          78 KLVELHGGRIEVESEPGGGTTFTITL  103 (103)
T ss_pred             HHHHHCCCEEEEEECCCCCEEEEEEC
T ss_conf             99998899899996599919999989