HHsearch alignment for GI: 254780701 and conserved domain: smart00433
>smart00433 TOP2c TopoisomeraseII. Eukaryotic DNA topoisomerase II, GyrB, ParE
Probab=92.10 E-value=0.026 Score=38.66 Aligned_cols=30 Identities=13% Similarity=0.195 Sum_probs=15.9
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 798999988777655688606798879999
Q gi|254780701|r 363 ADEKGMRQVILNLLSNAVKFTAIGGRVHVT 392 (495)
Q Consensus 363 ~D~~~L~qvl~NLi~NAiK~T~~gG~V~v~ 392 (495)
T Consensus 464 vDG~HI~~LLltff~r~~p~Li~~G~vy~a 493 (594)
T smart00433 464 VDGSHIKGLLLTFFYRYMPPLIEAGFVYIA 493 (594)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCEEEEE
T ss_conf 875789999999999876998867969998