HHsearch results for GI: 254780701 and protein with PDBid: 1gkz_A

>1gkz_A [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase; transferase, mitochondrial protein kinase, potassium; HET: ADP; 2.2A {Rattus norvegicus} SCOP: a.29.5.1 d.122.1.4 PDB: 1gjv_A 1gkx_A*
Probab=100.00  E-value=1.4e-32  Score=296.26  Aligned_cols=225  Identities=16%  Similarity=0.159  Sum_probs=186.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             99988999997764201389999999998503368789378999999999999999999999999987422001565310
Q gi|254780701|r  246 NLAKSRFLASMSHELRTPLNAILGFSEVIELETMGPLNNETYKEYIGDIHRSGQHLLNLINEILDLSRIEAGRYELSESA  325 (495)
Q Consensus       246 ~~~Ks~FlA~~SHELRTPL~aI~g~~elL~~~~~~~~~~~~~~~~l~~i~~s~~~L~~Li~~lLdlsrleag~~~l~~~~  325 (495)
                      +...+++++.+.||.+||++.|.+..+-+++..   ..++..+++++.+..+..++..+++++|++++.+.+...+....
T Consensus       118 ~~~f~~~l~~il~~~~~~l~~la~gl~e~~~~~---~~~~~~~~~Ld~~~~s~~~~~~li~~~L~l~~~~~~~vg~i~~~  194 (388)
T 1gkz_A          118 EAQYCQLVRQLLDDHKDVVTLLAEGLRESRKHI---EDEKLVRYFLDKTLTSRLGIRMLATHHLALHEDKPDFVGIICTR  194 (388)
T ss_dssp             HHHHHHHHHHHHHHTTTHHHHHHHHHHHSSSSC---CSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCTTEETTEEEE
T ss_pred             HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf             999999999998701649999999999998517---86699999999999978789999999998502478865532788


Q ss_pred             CCHHHHHHHHHHHHHHHHHHCC-CCCEECCCCC-CHHCCCCHHHHHHHHHHHHHHHHHCCCCCC--------EEEEEEEE
Q ss_conf             1199999999999999997311-2210003676-101047989999887776556886067988--------79999999
Q gi|254780701|r  326 ISLIDIVRECIIMLQLRAQEKN-IEIFQKIDPS-LSSVWADEKGMRQVILNLLSNAVKFTAIGG--------RVHVTVGW  395 (495)
Q Consensus       326 v~L~~li~~~~~~~~~~A~~~~-~~l~~~~~~~-~~~v~~D~~~L~qvl~NLi~NAiK~T~~gG--------~V~v~~~~  395 (495)
                      +++.++++++...+...+..+. ....+.+... ...+.+||..|+||+.||+.||+|||++++        .|.|.+. 
T Consensus       195 ~~l~~vi~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~dp~~L~~il~NLL~NAikat~e~~~~~~~~~p~I~v~i~-  273 (388)
T 1gkz_A          195 LSPKKIIEKWVDFARRLCEHKYGNAPRVRINGHVAARFPFIPMPLDYILPELLKNAMRATMESHLDTPYNVPDVVITIA-  273 (388)
T ss_dssp             ECHHHHHHHHHHHHHHHHHHHHSCCCCEEEEESTTCCEEECCHHHHHHHHHHHHHHHHHHHHTCTTCTTSCCCEEEEEE-
T ss_pred             CCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE-
T ss_conf             9999999999999999999853887403434788736147889999999999999999977167555777884799997-


Q ss_pred             ECCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCC--------------------CCCCCCCHHHHHHHHHHHCCCE
Q ss_conf             76985999998789978987854422652315777678--------------------9998880589999999961985
Q gi|254780701|r  396 TSGRGQYISIKDNGPGIAEGEIPTVLTSFGQGSIAIKS--------------------AEQGVGLGLPIAQSIMANHGGQ  455 (495)
Q Consensus       396 ~~~~~~~i~V~DtG~GI~~e~~~~iF~~F~r~~~~~~~--------------------~~~GtGLGLaIvk~lve~hgG~  455 (495)
                      ..++.+.|.|+|+|+|||+|++++||++||+......+                    ...|+||||+|||.+++.|||+
T Consensus       274 ~~~~~v~I~I~D~G~GIp~e~l~~IF~~fyTT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~GlGL~isr~~ae~~GG~  353 (388)
T 1gkz_A          274 NNDVDLIIRISDRGGGIAHKDLDRVMDYHFTTAEASTQDPRISPLFGHLDMHSGGQSGPMHGFGFGLPTSRAYAEYLGGS  353 (388)
T ss_dssp             ECSSEEEEEEECCSCCCCTTTTTTTTSTTCCCC-------------------------CCSCSSCHHHHHHHHHHHTTCE
T ss_pred             ECCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCE
T ss_conf             15886999998699987999998762755246765555543333212111135566789888704499999999986997


Q ss_pred             EEEEEECCCCEEEEEEECH
Q ss_conf             9999798995298898472
Q gi|254780701|r  456 FLIRSKLREGVEVIAILPN  474 (495)
Q Consensus       456 i~v~S~~G~Gt~f~v~LP~  474 (495)
                      |+++|.+|.||+|+++||.
T Consensus       354 I~v~S~~G~GT~~~l~L~~  372 (388)
T 1gkz_A          354 LQLQSLQGIGTDVYLRLRH  372 (388)
T ss_dssp             EEEEEETTTEEEEEEEEEC
T ss_pred             EEEEEECCCCEEEEEEECC
T ss_conf             8999547964699999789