HHsearch results for GI: 254780701 and protein with PDBid: 1gkz_A
>1gkz_A [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase; transferase, mitochondrial protein kinase, potassium; HET: ADP; 2.2A {Rattus norvegicus} SCOP: a.29.5.1 d.122.1.4 PDB: 1gjv_A 1gkx_A*
Probab=100.00 E-value=1.4e-32 Score=296.26 Aligned_cols=225 Identities=16% Similarity=0.159 Sum_probs=186.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 99988999997764201389999999998503368789378999999999999999999999999987422001565310
Q gi|254780701|r 246 NLAKSRFLASMSHELRTPLNAILGFSEVIELETMGPLNNETYKEYIGDIHRSGQHLLNLINEILDLSRIEAGRYELSESA 325 (495)
Q Consensus 246 ~~~Ks~FlA~~SHELRTPL~aI~g~~elL~~~~~~~~~~~~~~~~l~~i~~s~~~L~~Li~~lLdlsrleag~~~l~~~~ 325 (495)
+...+++++.+.||.+||++.|.+..+-+++.. ..++..+++++.+..+..++..+++++|++++.+.+...+....
T Consensus 118 ~~~f~~~l~~il~~~~~~l~~la~gl~e~~~~~---~~~~~~~~~Ld~~~~s~~~~~~li~~~L~l~~~~~~~vg~i~~~ 194 (388)
T 1gkz_A 118 EAQYCQLVRQLLDDHKDVVTLLAEGLRESRKHI---EDEKLVRYFLDKTLTSRLGIRMLATHHLALHEDKPDFVGIICTR 194 (388)
T ss_dssp HHHHHHHHHHHHHHTTTHHHHHHHHHHHSSSSC---CSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCTTEETTEEEE
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 999999999998701649999999999998517---86699999999999978789999999998502478865532788
Q ss_pred CCHHHHHHHHHHHHHHHHHHCC-CCCEECCCCC-CHHCCCCHHHHHHHHHHHHHHHHHCCCCCC--------EEEEEEEE
Q ss_conf 1199999999999999997311-2210003676-101047989999887776556886067988--------79999999
Q gi|254780701|r 326 ISLIDIVRECIIMLQLRAQEKN-IEIFQKIDPS-LSSVWADEKGMRQVILNLLSNAVKFTAIGG--------RVHVTVGW 395 (495)
Q Consensus 326 v~L~~li~~~~~~~~~~A~~~~-~~l~~~~~~~-~~~v~~D~~~L~qvl~NLi~NAiK~T~~gG--------~V~v~~~~ 395 (495)
+++.++++++...+...+..+. ....+.+... ...+.+||..|+||+.||+.||+|||++++ .|.|.+.
T Consensus 195 ~~l~~vi~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~dp~~L~~il~NLL~NAikat~e~~~~~~~~~p~I~v~i~- 273 (388)
T 1gkz_A 195 LSPKKIIEKWVDFARRLCEHKYGNAPRVRINGHVAARFPFIPMPLDYILPELLKNAMRATMESHLDTPYNVPDVVITIA- 273 (388)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHSCCCCEEEEESTTCCEEECCHHHHHHHHHHHHHHHHHHHHTCTTCTTSCCCEEEEEE-
T ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE-
T ss_conf 9999999999999999999853887403434788736147889999999999999999977167555777884799997-
Q ss_pred ECCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCC--------------------CCCCCCCHHHHHHHHHHHCCCE
Q ss_conf 76985999998789978987854422652315777678--------------------9998880589999999961985
Q gi|254780701|r 396 TSGRGQYISIKDNGPGIAEGEIPTVLTSFGQGSIAIKS--------------------AEQGVGLGLPIAQSIMANHGGQ 455 (495)
Q Consensus 396 ~~~~~~~i~V~DtG~GI~~e~~~~iF~~F~r~~~~~~~--------------------~~~GtGLGLaIvk~lve~hgG~ 455 (495)
..++.+.|.|+|+|+|||+|++++||++||+......+ ...|+||||+|||.+++.|||+
T Consensus 274 ~~~~~v~I~I~D~G~GIp~e~l~~IF~~fyTT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~GlGL~isr~~ae~~GG~ 353 (388)
T 1gkz_A 274 NNDVDLIIRISDRGGGIAHKDLDRVMDYHFTTAEASTQDPRISPLFGHLDMHSGGQSGPMHGFGFGLPTSRAYAEYLGGS 353 (388)
T ss_dssp ECSSEEEEEEECCSCCCCTTTTTTTTSTTCCCC-------------------------CCSCSSCHHHHHHHHHHHTTCE
T ss_pred ECCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCE
T ss_conf 15886999998699987999998762755246765555543333212111135566789888704499999999986997
Q ss_pred EEEEEECCCCEEEEEEECH
Q ss_conf 9999798995298898472
Q gi|254780701|r 456 FLIRSKLREGVEVIAILPN 474 (495)
Q Consensus 456 i~v~S~~G~Gt~f~v~LP~ 474 (495)
|+++|.+|.||+|+++||.
T Consensus 354 I~v~S~~G~GT~~~l~L~~ 372 (388)
T 1gkz_A 354 LQLQSLQGIGTDVYLRLRH 372 (388)
T ss_dssp EEEEEETTTEEEEEEEEEC
T ss_pred EEEEEECCCCEEEEEEECC
T ss_conf 8999547964699999789