HHsearch results for GI: 254780701 and protein with PDBid: 1kij_A
>1kij_A DNA gyrase subunit B; topoisomerase, gyrase B-coumarin complex; HET: DNA NOV; 2.30A {Thermus thermophilus} SCOP: d.14.1.3 d.122.1.2
Probab=96.55 E-value=0.0054 Score=42.69 Aligned_cols=86 Identities=19% Similarity=0.321 Sum_probs=58.4
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCC--CEEEEEEEEECCCEEEEEEEECCCCCCHHHH--------HHHCCCCCCCCCC--
Q ss_conf 798999988777655688606798--8799999997698599999878997898785--------4422652315777--
Q gi|254780701|r 363 ADEKGMRQVILNLLSNAVKFTAIG--GRVHVTVGWTSGRGQYISIKDNGPGIAEGEI--------PTVLTSFGQGSIA-- 430 (495)
Q Consensus 363 ~D~~~L~qvl~NLi~NAiK~T~~g--G~V~v~~~~~~~~~~~i~V~DtG~GI~~e~~--------~~iF~~F~r~~~~-- 430 (495)
.|..-|.+++.-+|.||+...-+| ..|.|.+. +++ .|+|+|+|+|||-+.. +-||.-..-+++-
T Consensus 28 t~~~gl~~i~~Eil~Na~De~~~~~~~~I~V~i~--~dg--~isV~ddGrGIPv~~h~~~~~~~~e~i~~~L~tg~nfd~ 103 (390)
T 1kij_A 28 TGVEGYHHLFKEILDNAVDEALAGYATEILVRLN--EDG--SLTVEDNGRGIPVDLMPEEGKPAVEVIYNTLHSGGKFEQ 103 (390)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHTTSCCEEEEEEC--TTS--CEEEEECSSCCCCSEETTTTEEHHHHHHHSSCEESGGGG
T ss_pred CCCCCCEEEEEEEEECHHHHHCCCCCCEEEEEEC--CCC--EEEEEECCCCEECCCCCCCCCCEEEEEEEEECCCCCCCC
T ss_conf 9987221788766685666743699966999996--998--599998887266478667797101999989845676578
Q ss_pred --CCCCCCCCCCHHHHHHHHHHHC
Q ss_conf --6789998880589999999961
Q gi|254780701|r 431 --IKSAEQGVGLGLPIAQSIMANH 452 (495)
Q Consensus 431 --~~~~~~GtGLGLaIvk~lve~h 452 (495)
.+...+..|+|.++|--+-+..
T Consensus 104 ~~~k~sgG~nGvGa~l~NalS~~f 127 (390)
T 1kij_A 104 GAYKVSGGLHGVGASVVNALSEWT 127 (390)
T ss_dssp SSCCCCSCSSTTSHHHHHHTEEEE
T ss_pred CCCCCCCCCCCCCCHHHHHCCHHE
T ss_conf 875302675764427652325203